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Add new module csvtk/mutate2#10284

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fellen31 merged 5 commits intonf-core:masterfrom
fellen31:add-csvtk-mutate
Mar 2, 2026
Merged

Add new module csvtk/mutate2#10284
fellen31 merged 5 commits intonf-core:masterfrom
fellen31:add-csvtk-mutate

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PR checklist

Closes #XXX

  • This comment contains a description of changes (with reason).
  • If you've fixed a bug or added code that should be tested, add tests!
  • If you've added a new tool - have you followed the module conventions in the contribution docs
  • If necessary, include test data in your PR.
  • Remove all TODO statements.
  • Broadcast software version numbers to topic: versions - See version_topics
  • Follow the naming conventions.
  • Follow the parameters requirements.
  • Follow the input/output options guidelines.
  • Add a resource label
  • Use BioConda and BioContainers if possible to fulfil software requirements.
  • Ensure that the test works with either Docker / Singularity. Conda CI tests can be quite flaky:
    • For modules:
      • nf-core modules test <MODULE> --profile docker
      • nf-core modules test <MODULE> --profile singularity
      • nf-core modules test <MODULE> --profile conda
    • For subworkflows:
      • nf-core subworkflows test <SUBWORKFLOW> --profile docker
      • nf-core subworkflows test <SUBWORKFLOW> --profile singularity
      • nf-core subworkflows test <SUBWORKFLOW> --profile conda

@fellen31 fellen31 marked this pull request as ready for review February 27, 2026 15:08
@fellen31 fellen31 changed the title Add new module csvtk mutate2 Add new module csvtk/mutate2 Feb 27, 2026
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@kubranarci kubranarci left a comment

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seems good to me, just a few questions to clarify.

Comment thread modules/nf-core/csvtk/mutate2/main.nf Outdated
Comment thread modules/nf-core/csvtk/mutate2/main.nf
Comment thread modules/nf-core/csvtk/mutate2/meta.yml
@fellen31 fellen31 added this pull request to the merge queue Mar 2, 2026
Merged via the queue into nf-core:master with commit 8637b47 Mar 2, 2026
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@fellen31 fellen31 deleted the add-csvtk-mutate branch March 2, 2026 08:18
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2 participants