Search results

Avoiding storing the entire graph in memory

externalBugs / issues with other libraries/dependenciesBugs / issues with other libraries/dependencies

futureideaslonger-term stufflonger-term stuff

performance

question

refactoring

Status: Open.

#423 In marbl/MetagenomeScope;

· fedarko opened on Apr 29, 2026

Turn off original_graph copying and extra sanity checking for large graphs?

performance

refactoring

Status: Open.

#421 In marbl/MetagenomeScope;

· fedarko opened on Apr 28, 2026

Add a modifier drawing option that hides big components?

performance

Status: Open.

#420 In marbl/MetagenomeScope;

· fedarko opened on Apr 28, 2026

Standardize minimum length

assemblersMaintaining compatibility with certain assemblers, showing unique information, etcMaintaining compatibility with certain assemblers, showing unique information, etc

refactoring

testing

Status: Open.

#419 In marbl/MetagenomeScope;

· fedarko opened on Apr 28, 2026

Sort components in descending order by length as a tiebreaker

layoutgraph drawing / layoutgraph drawing / layout

lowpriorityfeature

refactoring

Status: Open.

#418 In marbl/MetagenomeScope;

· fedarko opened on Apr 23, 2026

Partial searching

assemblersMaintaining compatibility with certain assemblers, showing unique information, etcMaintaining compatibility with certain assemblers, showing unique information, etc

lowpriorityfeature

Status: Open.

#417 In marbl/MetagenomeScope;

· fedarko opened on Apr 16, 2026

Add "# gaps" column to path table

lowpriorityfeature

tablesTables of paths / selected elementsTables of paths / selected elements

Status: Open.

#416 In marbl/MetagenomeScope;

· fedarko opened on Apr 16, 2026

Custom type for the "CC #" column in the paths table

lowpriorityfeature

tablesTables of paths / selected elementsTables of paths / selected elements

Status: Open.

#415 In marbl/MetagenomeScope;

· fedarko opened on Apr 16, 2026

Remove pandas dependency

administrativeUsually non-code-related issues we need to take care ofUsually non-code-related issues we need to take care of

externalBugs / issues with other libraries/dependenciesBugs / issues with other libraries/dependencies

refactoring

Status: Open.

#414 In marbl/MetagenomeScope;

· fedarko opened on Apr 11, 2026

Show version in visualization interface

lowpriorityfeature

Status: Open.

#413 In marbl/MetagenomeScope;

· fedarko opened on Apr 8, 2026

Add "magic lens" option: click on a node and filter edges to just those that are adjacent (or within some hops)

highpriorityfeature

styleCSS / graph stylingCSS / graph styling

Status: Open.

#412 In marbl/MetagenomeScope;

· fedarko opened on Apr 8, 2026

Better labels for split nodes

lowpriorityfeature

styleCSS / graph stylingCSS / graph styling

Status: Open.

#411 In marbl/MetagenomeScope;

· fedarko opened on Apr 8, 2026