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  1. Asian-Pan-Genome/APGp1 Asian-Pan-Genome/APGp1 Public

    Phase 1 of APG

    Perl 2

  2. Asian-Pan-Genome/ArchaicIntrogression Asian-Pan-Genome/ArchaicIntrogression Public

    Scripts and datasets in the study of archaic introgression in modern human genomes

    Python 4

  3. GCI GCI Public

    A program for assessing the T2T genome continuity

    Python 93 4

  4. Han-Cao/collapse-bubble Han-Cao/collapse-bubble Public

    Pangenome structural variation (SV) merging and deduplication

    Python 11 2

  5. vcf2fasta vcf2fasta Public

    Forked from santiagosnchez/vcf2fasta

    Converts a VCF file to a FASTA alignment provided a reference genome and a GFF file

    Python 1