Integrated time-series analysis and high-content CRISPR screening delineate the dynamics of macrophage immune regulation
Theoretical analysis code for antigen encoding from cytokine dynamics.
Source code for the At-Risk RA work
scATAC-seq pipeline mapping mucosal immunity and host-microbe crosstalk. Profiles physical chromatin accessibility of Trm cells (Itgae/CD103) and Secretory IgA Plasma cells (Igj) to decode intestinal defense mechanisms.
An integrated computational pipeline for CRISPR-Cas13a (SHERLOCK) malaria diagnostics and trans-kingdom neuro-immune mapping, linking PfK13-driven pathogen detection to microglial homeostatic (CX3CR1/Iba1) set-points and Gut-Brain Axis (GBA) dysregulation.
Reproducible Systems Immunology Framework for Modeling CD40–TRAF6 Signaling Dynamics and CRISPR Synergy
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