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scvi
Here are 4 public repositories matching this topic...
Lightweight, GPU-accelerated single-cell RNA-seq workflow for exploring the colorectal tumor microenvironment (CRC-TME) using Scanpy and scVI.
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Updated
Jan 2, 2026 - Python
Regularized scVI for complex multiome single-cell/nucleus datasets: ambient RNA correction, dispersion prior, and batch-free decoder act as structural inductive biases that make large-architecture VAEs well-behaved without per-dataset tuning.
rna-seq pytorch dispersion regularization single-cell variational-autoencoder batch-correction ambient-rna scverse scvi cell2location single-nucleus
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Updated
Mar 18, 2026 - Python
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