OVO, an open-source ecosystem for de novo protein design
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Updated
Apr 25, 2026 - Python
OVO, an open-source ecosystem for de novo protein design
Official repository for the ProteinDJ protein design pipeline
A Nextflow pipeline for protein binder design
A modular, extensible peptide design pipeline with target preparation, backbone generation, sequence design, scoring, and ranking. Full local CPU pipeline, and backend hooks for RFpeptides, ProteinMPNN/LigandMPNN, and ColabFold.
Protein binder design GUI
구조 기반 de novo 항체 설계
🧬 Lectures for course ML-protein-design
De novo protein binder design pipeline: motif-scaffolded RFdiffusion + ProteinMPNN + AlphaFold2 self-consistency validation. PD-L1 reference example.
Molecular dynamic simulation of RFdiffusion/ProteinMPNN designed HMERF mutated titin Ig152/Fn3-119 domain protein binder
Manage protein design processes
Personalized lymphoma therapy design with Gemma 4, AlphaFold, RFdiffusion. Kaggle Gemma 4 Good Hackathon submission.
🧬 Experiments and setup of RFdiffusion/ProteinMPNN running on macOS Apple Silicon (CPU).
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