Maven GUI: Metabolomics Analysis and Visualization Engine

Client for the Cromwell workflow engine

Emending Alignment of Spliced Transcript Reads

A phasing and imputation pipeline for NGS data

A tool to model the evolution and structural impact of alternative splicing

Phylogeny reconstruction based on spaced word matches

To predict cryptic cleavage sites in proteins with non-canonical signal peptides

Filter alignments on sequence length and/or identity of first nucleotide.

Binding site prediction on Efflux protein using CNN

Energy Evaluation of Single Mutant Homology Models

Production-ready FastAPI backend for the Beeline gene regulatory network inference platform. Exposes 12 GRN inference algorithms through RESTful APIs with asynchronous job orchestration using Celery.

This is my custom profile. As a developer, I simply enjoy creating products that impact the lives of others.

Java code that finds pairwise sequence alignments for all possible pairs of sequences and construct similarity matrix.

A fork of the original https://github.com/medvedevgroup/UST tool.

Collection of some function to deal with ADAM

Implementation of Needleman-Wunsch's algorithm for sequences alignment using BLOSUM62 matrix

The set of scripts to obtain GRCh38/hg38 exons genome track

Repository for the Bioinformatics project

Training bioinformatics