[Maintenance][Testing] Bump CI dependencies, Add AddressSanitizer Test

.github/dependabot.yml

@@ -0,0 +1,8 @@
+version: 2
+updates:
+  - package-ecosystem: "github-actions"
+    directory: "/"
+    schedule:
+      interval: "monthly"
+    labels:
+      - "ci"

.github/workflows/build.yaml

@@ -1,15 +1,18 @@
 name: Build and Test Package
 on: [push, pull_request]
+concurrency:
+  group: ${{ github.workflow }}-${{ github.ref }}
+  cancel-in-progress: true
 jobs:
   build-sdist:
     name: Build Source Dist
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@v5
         with:
           submodules: recursive
       - name: Set Up Python
-        uses: actions/setup-python@v5
+        uses: actions/setup-python@v6
         with:
           python-version: '3.x'
       - name: Install Tools
@@ -18,11 +21,11 @@ jobs:
       - name: Source Packaging
         run: |
           python -m build --sdist
-      - uses: actions/upload-artifact@v4
+      - uses: actions/upload-artifact@v7
         with:
           name: sdist
           path: 'dist/spotfire-*.tar.gz'
-      - uses: actions/upload-artifact@v4
+      - uses: actions/upload-artifact@v7
         with:
           name: test-files
           path: |
@@ -50,12 +53,12 @@ jobs:
         operating-system: ['ubuntu-latest', 'windows-latest']
       fail-fast: false
     steps:
-      - uses: actions/download-artifact@v4
+      - uses: actions/download-artifact@v8
         with:
           name: sdist
           path: dist
       - name: Set Up Python
-        uses: actions/setup-python@v5
+        uses: actions/setup-python@v6
         with:
           python-version: ${{ matrix.python-version }}
       - name: Install Build Requirements
@@ -81,7 +84,7 @@ jobs:
           python -m build --wheel
           # Move wheel out of build dir into top-level dist dir 
           mv dist\*.whl ..\dist
-      - uses: actions/upload-artifact@v4
+      - uses: actions/upload-artifact@v7
         with:
           name: wheel-${{ matrix.python-version }}-${{ matrix.operating-system }}
           path: 'dist/spotfire-*.whl'
@@ -96,16 +99,16 @@ jobs:
         test-environment: ${{ fromJson(needs.build-sdist.outputs.test-environments) }}
       fail-fast: false
     steps:
-      - uses: actions/download-artifact@v4
+      - uses: actions/download-artifact@v8
         with:
           name: wheel-${{ matrix.python-version }}-${{ matrix.operating-system }}
           path: dist
-      - uses: actions/download-artifact@v4
+      - uses: actions/download-artifact@v8
         with:
           name: test-files
           path: test-files
       - name: Set Up Python
-        uses: actions/setup-python@v5
+        uses: actions/setup-python@v6
         with:
           python-version: ${{ matrix.python-version }}
       - name: Install Dependencies (Linux)
@@ -122,7 +125,7 @@ jobs:
         env:
           TEST_FILES_DIR: ${{ github.workspace }}/test-files/spotfire/test/files
           TEST_ENVIRONMENT: ${{ matrix.test-environment }}
-      - uses: actions/upload-artifact@v4
+      - uses: actions/upload-artifact@v7
         if: ${{ always() }}
         with:
           name: test-results-${{ matrix.python-version }}-${{ matrix.operating-system }}-${{ matrix.test-environment }}
@@ -138,14 +141,14 @@ jobs:
           echo -n "python-version="  >> $GITHUB_OUTPUT
           echo '${{ needs.build-sdist.outputs.python-versions }}' | sed -e 's/[^"]*"//' -e 's/".*//' >> $GITHUB_OUTPUT
       - name: Set Up Python
-        uses: actions/setup-python@v5
+        uses: actions/setup-python@v6
         with:
           python-version: ${{ steps.version.outputs.python-version }}
-      - uses: actions/download-artifact@v4
+      - uses: actions/download-artifact@v8
         with:
           name: sdist
           path: dist
-      - uses: actions/download-artifact@v4
+      - uses: actions/download-artifact@v8
         with:
           name: wheel-${{ steps.version.outputs.python-version }}-ubuntu-latest
           path: dist
@@ -163,3 +166,36 @@ jobs:
           mypy spotfire
           cython-lint spotfire vendor
           find spotfire -name '*_helpers.[ch]' | xargs cpplint --repository=.
+  sanitizers:
+    name: AddressSanitizer + UBSan
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v5
+        with:
+          submodules: recursive
+      - uses: actions/setup-python@v6
+        with:
+          python-version: '3.13'
+      - name: Install dependencies
+        run: |
+          pip install setuptools Cython "numpy>=2.0.0rc1"
+          pip install ".[polars]"
+          pip install html-testRunner polars pillow
+      - name: Rebuild extension with AddressSanitizer + UBSan
+        env:
+          CFLAGS: "-fsanitize=address,undefined -fno-omit-frame-pointer -g -D_FORTIFY_SOURCE=2 -fstack-protector-strong"
+          LDFLAGS: "-fsanitize=address,undefined"
+        run: python setup.py build_ext --inplace
+      - name: Run tests under AddressSanitizer + UBSan
+        run: |
+          LIBASAN=$(gcc -print-file-name=libasan.so)
+          LD_PRELOAD="$LIBASAN" PYTHONMALLOC=malloc python -m spotfire.test
+        env:
+          ASAN_OPTIONS: "detect_leaks=0:allocator_may_return_null=1:intercept_cxx_exceptions=0"
+          UBSAN_OPTIONS: "print_stacktrace=1:halt_on_error=1"
+          TEST_ENVIRONMENT: asan
+      - uses: actions/upload-artifact@v7
+        if: always()
+        with:
+          name: test-results-sanitizers
+          path: build/test-results/*.html

.github/workflows/pylint.yaml

@@ -7,11 +7,11 @@ jobs:
     name: Check Linters
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@v5
         with:
           submodules: recursive
       - name: Set Up Python
-        uses: actions/setup-python@v5
+        uses: actions/setup-python@v6
         with:
           python-version: '3.x'
       - name: Install Tools

.github/workflows/sbom.yaml

@@ -35,7 +35,7 @@ jobs:
     outputs:
       python-versions: ${{ steps.dynamic.outputs.pythons }}
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@v5
       - name: Read python-versions
         id: dynamic
         run: |
@@ -48,14 +48,14 @@ jobs:
     needs: setup
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@v5
         with:
           submodules: recursive   # needed for vendor/sbdf-c when building/installing sdist
 
       # workflow_run: reuse artifact from build.yaml — no rebuild
       - name: Download sdist (from workflow_run)
         if: github.event_name == 'workflow_run'
-        uses: actions/download-artifact@v4
+        uses: actions/download-artifact@v8
         with:
           name: sdist
           path: dist
@@ -64,7 +64,7 @@ jobs:
 
       # push / release / workflow_dispatch: build fresh
       - name: Set Up Python
-        uses: actions/setup-python@v5
+        uses: actions/setup-python@v6
         with:
           python-version: '3.x'
       - name: Build sdist
@@ -118,7 +118,7 @@ jobs:
             --tool     "trivy-${{ env.TRIVY_VERSION }}"
 
       - name: Upload SBOM artifact
-        uses: actions/upload-artifact@v4
+        uses: actions/upload-artifact@v7
         with:
           name: sbom-sdist
           path: spotfire-sdist.sbom.spdx.json
@@ -133,14 +133,14 @@ jobs:
         python-version: ${{ fromJson(needs.setup.outputs.python-versions) }}
       fail-fast: false
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@v5
         with:
           submodules: recursive   # needed for vendor/sbdf-c when building wheel fresh
 
       # workflow_run: reuse the ubuntu wheel artifact from build.yaml — no rebuild
       - name: Download wheel (from workflow_run)
         if: github.event_name == 'workflow_run'
-        uses: actions/download-artifact@v4
+        uses: actions/download-artifact@v8
         with:
           name: wheel-${{ matrix.python-version }}-ubuntu-latest
           path: dist
@@ -150,7 +150,7 @@ jobs:
       # Also download the sdist so scan-env can install from it (wheel is platform-specific)
       - name: Download sdist (from workflow_run)
         if: github.event_name == 'workflow_run'
-        uses: actions/download-artifact@v4
+        uses: actions/download-artifact@v8
         with:
           name: sdist
           path: dist
@@ -160,7 +160,7 @@ jobs:
       # push / release / workflow_dispatch: build fresh on Linux
       - name: Set Up Python
         if: github.event_name != 'workflow_run'
-        uses: actions/setup-python@v5
+        uses: actions/setup-python@v6
         with:
           python-version: ${{ matrix.python-version }}
       - name: Build wheel
@@ -221,7 +221,7 @@ jobs:
             --tool     "trivy-${{ env.TRIVY_VERSION }}"
 
       - name: Upload SBOM artifact
-        uses: actions/upload-artifact@v4
+        uses: actions/upload-artifact@v7
         with:
           name: sbom-wheel-${{ matrix.python-version }}
           path: spotfire-wheel-${{ matrix.python-version }}.sbom.spdx.json
@@ -234,7 +234,7 @@ jobs:
     runs-on: ubuntu-latest
     steps:
       - name: Download all SBOM artifacts
-        uses: actions/download-artifact@v4
+        uses: actions/download-artifact@v8
         with:
           pattern: sbom-*
           path: all-sboms

spotfire/test/test_sbdf.py

@@ -11,9 +11,19 @@
 import pandas as pd
 import pandas.testing as pdtest
 import numpy as np
-import geopandas as gpd
-import matplotlib.pyplot
-import seaborn
+try:
+    import geopandas as gpd  # type: ignore[import-not-found]
+except ImportError:
+    gpd = None  # type: ignore[assignment]
+try:
+    import matplotlib  # type: ignore[import-not-found]
+    import matplotlib.pyplot
+except ImportError:
+    matplotlib = None  # type: ignore[assignment]
+try:
+    import seaborn  # type: ignore[import-not-found]
+except ImportError:
+    seaborn = None  # type: ignore[assignment]
 import PIL.Image
 from packaging import version
 
@@ -137,6 +147,7 @@ def test_read_10001(self):
         self.assertEqual(dataframe.at[10000, "String"], "kiwis")
         self.assertEqual(dataframe.at[10000, "Binary"], b"\x7c\x7d\x7e\x7f")
 
+    @unittest.skipIf(gpd is None, "geopandas not installed")
     def test_read_write_geodata(self):
         """Test that geo-encoded data is properly converted to/from ``GeoDataFrame``."""
         gdf = sbdf.import_data(utils.get_test_data_file("sbdf/NACountries.sbdf"))
@@ -468,6 +479,7 @@ def test_numpy_timedelta_resolution(self):
                 val = df2.at[1, 'x']
                 self.assertEqual(val, target)
 
+    @unittest.skipIf(matplotlib is None, "matplotlib not installed")
     def test_image_matplot(self):
         """Verify Matplotlib figures export properly."""
         matplotlib.pyplot.clf()
@@ -480,6 +492,7 @@ def test_image_matplot(self):
         else:
             self.fail(f"Expected PNG bytes, got {type(image)}: {image!r}")
 
+    @unittest.skipIf(seaborn is None, "seaborn not installed")
     def test_image_seaborn(self):
         """Verify Seaborn grids export properly."""
         matplotlib.pyplot.clf()