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1. tinyLM tinyLM Public

   This is a *barebones* language model that I wrote in 2 hours for experimental purposes

   Python

2. Genomic_Mechanistic_Interpretability Genomic_Mechanistic_Interpretability Public

   Analyzing a Genomic Foundation Model through activation patching

   Python

3. Numerical-Analysis Numerical-Analysis Public

   A collection of projects related to numerical analysis

   Python

4. Peptide-MHC_Binding_Classifier Peptide-MHC_Binding_Classifier Public

   Peptide-MHC Binding Classifier is a deep learning model that predicts whether a peptide will be presented by MHC Class I proteins. It uses a two-tower CNN architecture to generalize across alleles,…

   Jupyter Notebook

5. Protein_Sequence_Analysis Protein_Sequence_Analysis Public

   Basic protein sequence analysis notebook

   Jupyter Notebook

6. PhyloLM PhyloLM Public

   Protein Phylogeny Language Model based on the Phyloformer Model

   Python