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species list
Marta Bleda edited this page Mar 3, 2015
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2 revisions
species |
Name | Scientific name | Assembly |
|---|---|---|---|
| hsapiens | human | Homo sapiens | GRCh37.p13 |
| mmusculus | mouse | Mus musculus | GRCm38.p2 |
| rnorvegicus | rat | Rattus norvegicus | Rnor_5.0 |
| ptroglodytes | chimp | Pan troglodytes | CHIMP2.1.4 |
| ggorilla | gorilla | Gorilla gorilla | gorGor3.1 |
| pabelii | orangutan | Pongo abelii | PPYG2 |
| mmulatta | macaque | Macaca mulatta | MMUL 1.0 |
| sscrofa | pig | Sus scrofa | Sscrofa10.2 |
| cfamiliaris | dog | Canis familiaris | CanFam 3.1 |
| ecaballus | horse | Equus caballus | Equ Cab 2 |
| ocuniculus | rabbit | Oryctolagus cuniculus | OryCun2.0 |
| ggallus | chicken | Gallus gallus | Galgal4 |
| btaurus | cow | Bos taurus | UMD3.1 |
| fcatus | cat | Felis catus | Felis_catus_6.2 |
| drerio | zebrafish | Danio rerio | Zv9 |
| cintestinalis | Ciona intestinalis | KH | |
| dmelanogaster | fruitfly | Drosophila melanogaster | BDGP 5 |
| dsimulans | Drosophila simulans | dsim_caf1 | |
| dyakuba | Drosophila yakuba | dyak_caf1 | |
| agambiae | mosquito | Anopheles gambiae | AgamP4 |
| celegans | worm | Caenorhabditis elegans | WS235 |
| scerevisiae | yeast | Saccharomyces cerevisiae | R64-1-1 |
| spombe | Schizosaccharomyces pombe | ASM294v2 | |
| afumigatus | Aspergillus fumigatus | TIGR | |
| aniger | Aspergillus niger | DSM | |
| anidulans | Aspergillus nidulans | ASM1142v1 | |
| aoryzae | Aspergillus oryzae | NITE | |
| pfalciparum | malaria parasite | Plasmodium falciparum | 3D7 |
| lmajor | Plasmodium falciparum | ASM276v1 | |
| athaliana | Arabidopsis thaliana | TAIR10 | |
| alyrata | Arabidopsis lyrata | v.1.0 | |
| bdistachyon | Brachypodium distachyon | v1.0 | |
| osativa | Oryza sativa Indica | ASM465v1 | |
| gmax | Glycine max | V1.0 | |
| vvinifera | Vitis vinifera | IGGP_12x | |
| zmays | Zea mays | AGPv3 |