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Fixed, -lcurl -lssl -lcrypto missing while make. and generalize PATH for EasyBuild #8

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Fixed, -lcurl -lssl -lcrypto missing while make. and generalize PATH for EasyBuild #8

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12 changes: 6 additions & 6 deletions makefile
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Original file line number Diff line number Diff line change
Expand Up @@ -2,13 +2,13 @@
CXX=g++ -std=c++11

#HTSLIB LIBRARY [SPECIFY YOUR OWN PATHS]
HTSLIB_INC=$(HOME)/Tools/htslib-1.9
HTSLIB_LIB=$(HOME)/Tools/htslib-1.9/libhts.a
HTSLIB_INC=$(EBROOTHTSLIB)/include/htslib
HTSLIB_LIB=$(EBROOTHTSLIB)/lib/libhts.a

#BOOST IOSTREAM & PROGRAM_OPTION LIBRARIES [SPECIFY YOUR OWN PATHS]
BOOST_INC=/usr/include
BOOST_LIB_IO=/usr/lib/x86_64-linux-gnu/libboost_iostreams.a
BOOST_LIB_PO=/usr/lib/x86_64-linux-gnu/libboost_program_options.a
BOOST_INC=$(EBROOTBOOST)/include/boost
BOOST_LIB_IO=$(EBROOTBOOST)/lib/libboost_iostreams.a
BOOST_LIB_PO=$(EBROOTBOOST)/lib/libboost_program_options.a

#HTSLIB LIBRARY [SPECIFY YOUR OWN PATHS]
#HTSLIB_INC=/software/UHTS/Analysis/samtools/1.4/include
Expand All @@ -33,7 +33,7 @@ CXXFLAG=-O3 -mavx2 -mfma
LDFLAG=-O3

#DYNAMIC LIBRARIES
DYN_LIBS=-lz -lbz2 -lm -lpthread -llzma
DYN_LIBS=-lz -lbz2 -lm -lpthread -llzma -lcurl -lssl -lcrypto

#SHAPEIT SOURCES & BINARY
BFILE=bin/shapeit4
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