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19 changes: 19 additions & 0 deletions getParameters.m
Original file line number Diff line number Diff line change
Expand Up @@ -3,5 +3,24 @@
%parameters for a given trial where each row is an individual animal and
%each column is the chosen parameter on each trial

mouseNames = fieldnames(dataSet);

allParameters = {};

for m = 1:length(mouseNames)
thisMouse = dataSet.(mouseNames{m});
thisTask = thisMouse.(task);
thisParameter = thisTask.(parameter);

allParameters{m} = thisParameter;
end

maxLength = max(cellfun(@length, allParameters));
parameters = nan(length(allParameters), maxLength);

for i = 1:length(allParameters)
parameters(i,1:length(allParameters{1,i})) = allParameters{1,i};
end

end

14 changes: 14 additions & 0 deletions splitData.m
Original file line number Diff line number Diff line change
@@ -1,6 +1,20 @@
function [ control, test ] = splitData( dataSet )
%SPLITDATA splits a standard AutonoMouse data set into two structures, one
%for control animals, one for test animals based on NMDA parameter
control = struct();
test = struct();

mouseNames = fieldnames(dataSet);

for m = 1:length(mouseNames)
thisMouse = dataSet.(mouseNames{m});

if thisMouse.NMDA > 0
test.(mouseNames{m}) = thisMouse;
else
control.(mouseNames{m}) = thisMouse;
end
end

end