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Alaska Fisheries Science Center

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  1. nfs-berpac nfs-berpac Public

    Telemetry data and analysis from bio-logger deployments on northern fur seals in the Bering and Pacific. Maintained by Josh London (@jmlondon / josh.london@noaa.gov)

    R 7

  2. wcUtils wcUtils Public

    R package for working with Wildlife Computers data formats. Maintained by Josh London (@jmlondon / josh.london@noaa.gov)

    R 5 2

  3. berchukseals-haulout berchukseals-haulout Public

    Repository and research compendium in support of the manuscript "Spring haul-out behavior of seals in the Bering and Chukchi seas." Maintained by Josh London (@jmlondon / josh.london@noaa.gov)

    HTML 5

  4. nmfs-sar-template-repo nmfs-sar-template-repo Public template

    A template repository for marine mammal stock assessment reports

    JavaScript 4

  5. EBS_pollock EBS_pollock Public

    Working repository for eastern Bering Sea pollock stock assessment analyses

    Scheme 4 1

  6. SparseNUTS SparseNUTS Public

    Sparse no-U-turn sampling for TMB and RTMB models

    R 4

Repositories

Showing 10 of 46 repositories
  • mvobservr-testbench Public

    Testing the multivariate observer effects (MOE) framework

    noaa-afsc/mvobservr-testbench’s past year of commit activity
    R 1 0 10 1 Updated Mar 11, 2026
  • iceseals2024 Public

    Maintained by Josh London (@jmlondon / josh.london@noaa.gov)

    noaa-afsc/iceseals2024’s past year of commit activity
    R 1 0 0 0 Updated Mar 10, 2026
  • acoustic-seafloor-habitat-classification Public

    This repository stores a machine learning model for using calibrated singe beam hydroacoustic data to determine seafloor habitat type. Outputs from the model for the Gulf of Alaska are also included. Details are in "Seabed classification in the Gulf of Alaska from acoustic surveys using deep learning" by K. Agarwal, C. Rooper and K. Williams

    noaa-afsc/acoustic-seafloor-habitat-classification’s past year of commit activity
    Python 1 1 0 0 Updated Mar 9, 2026
  • gdrive Public

    Tools for streamlining data uploads and downloads from Google Shared Drives and versioning data. Leverages the googledrive R package and customized API calls to facilitate the collaborative development and maintain the segregation of data from code.

    noaa-afsc/gdrive’s past year of commit activity
    R 1 0 1 0 Updated Feb 27, 2026
  • SBS_SelectivityAnalysis_TannerCrab Public

    Collaborative side-by-side haul study to estimate Tanner crab selectivity in the NMFS EBS bottom trawl survey

    noaa-afsc/SBS_SelectivityAnalysis_TannerCrab’s past year of commit activity
    R 0 0 0 0 Updated Feb 25, 2026
  • goa_deepwater Public

    This repository houses stock assessment and harvest projection input files and code used to complete the assessment. It is maintained by @careymcgilliard

    noaa-afsc/goa_deepwater’s past year of commit activity
    Scheme 0 0 0 0 Updated Feb 23, 2026
  • tier4techmemo Public

    R code to reproduce case study results for the AFSC Tech Memo, "A Tier 4 toolkit for Alaska groundfish stocks: methods, diagnostics, and examples."

    noaa-afsc/tier4techmemo’s past year of commit activity
    R 0 0 0 0 Updated Feb 18, 2026
  • ateam-manual Public

    This is the repository for the FMA Analytical Services Program onboarding and operating manual

    noaa-afsc/ateam-manual’s past year of commit activity
    JavaScript 1 0 0 0 Updated Feb 17, 2026
  • tier4tools Public

    R package for computing fishing mortality-based spawning potential ratio (SPR) reference points for Tier 4 groundfish stock assessments used by the North Pacific Fishery Management Council. Supports single-species and multispecies analyses, sensitivity evaluation of key biological and fishery assumptions, and generation of report-ready graphics.

    noaa-afsc/tier4tools’s past year of commit activity
    R 1 0 0 0 Updated Feb 13, 2026
  • SparseNUTS Public

    Sparse no-U-turn sampling for TMB and RTMB models

    noaa-afsc/SparseNUTS’s past year of commit activity
    R 4 0 2 0 Updated Feb 11, 2026
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