Snakemake Project Creator

Usage

A simple bash script to automate the initialization of a snakemake project. Snakemake documantation

The scripts creates the following structure:

├── Snakemake_project
│   ├── README.md
│   ├── Snakefile
│   ├── data
│   │   └── input.txt
│   ├── results
│   ├── scripts
│   └── workflow

Installation

Before runing the script, make it executable:

sudo chmod +x smtemp.sh

Run the script:

./smtemp.sh