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Lignum Vitae

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  1. goombay goombay Public

    Python implementation of several sequence alignment algorithms such as Waterman-Smith-Beyer, Gotoh, and Needleman-Wunsch intended to calculate distance, show alignment, and display the underlying m…

    Python 21 3

  2. spindalis spindalis Public

    A bioinformatics-focused library for numerical modeling, optimisation, and simulation written in Rust

    Rust 16 11

  3. biobase biobase Public

    A home for all biological/bioinformatics constants from protein strings to BLOSUM matrices.

    Python 12 5

  4. goombay-rs goombay-rs Public

    Rust implementation of my goombay python project. Implements several sequence alignment algorithms such as Waterman-Smith-Beyer, Gotoh, and Needleman-Wunsch intended to calculate distance, show ali…

    Rust 7 4

  5. jedvek jedvek Public

    Multidimensional Rust vectors with a 1D footprint

    Rust 2 1

  6. pyrolysate pyrolysate Public

    API and CLI that convert URLs and emails to CSV, JSON, or text with outputs to console or to a file

    Python

Repositories

Showing 6 of 6 repositories
  • jedvek Public

    Multidimensional Rust vectors with a 1D footprint

    lignum-vitae/jedvek’s past year of commit activity
    Rust 2 MIT 1 2 0 Updated Apr 2, 2026
  • biobase Public

    A home for all biological/bioinformatics constants from protein strings to BLOSUM matrices.

    lignum-vitae/biobase’s past year of commit activity
    Python 12 MIT 5 3 (1 issue needs help) 0 Updated Apr 2, 2026
  • pyrolysate Public

    API and CLI that convert URLs and emails to CSV, JSON, or text with outputs to console or to a file

    lignum-vitae/pyrolysate’s past year of commit activity
    Python 0 CC0-1.0 0 0 0 Updated Apr 2, 2026
  • spindalis Public

    A bioinformatics-focused library for numerical modeling, optimisation, and simulation written in Rust

    lignum-vitae/spindalis’s past year of commit activity
    Rust 16 MIT 11 12 (1 issue needs help) 2 Updated Mar 2, 2026
  • goombay-rs Public

    Rust implementation of my goombay python project. Implements several sequence alignment algorithms such as Waterman-Smith-Beyer, Gotoh, and Needleman-Wunsch intended to calculate distance, show alignment, and display the underlying matrices.

    lignum-vitae/goombay-rs’s past year of commit activity
    Rust 7 MIT 4 7 (1 issue needs help) 2 Updated Mar 2, 2026
  • goombay Public

    Python implementation of several sequence alignment algorithms such as Waterman-Smith-Beyer, Gotoh, and Needleman-Wunsch intended to calculate distance, show alignment, and display the underlying matrices.

    lignum-vitae/goombay’s past year of commit activity
    Python 21 MIT 3 8 (2 issues need help) 1 Updated Mar 2, 2026

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