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Support for 'X' and '=' in CIGAR strings in the evaluation script#6

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Support for 'X' and '=' in CIGAR strings in the evaluation script#6
karel-brinda wants to merge 1 commit into
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karel-brinda:master

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Thank you for creating wgsim!!

This is a minor bug in the evaluation script. When a mapper used operations 'X' and '=' in a CIGAR string instead of 'M', the right coordinate was not computed correctly.

jkbonfield added a commit to samtools/samtools that referenced this pull request Jul 29, 2015
Author: karel-brinda.
Untracked in git due to no common ancestor.
jmarshall pushed a commit to samtools/samtools that referenced this pull request Aug 21, 2015
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