Support for 'X' and '=' in CIGAR strings in the evaluation script#6
Open
karel-brinda wants to merge 1 commit into
Open
Support for 'X' and '=' in CIGAR strings in the evaluation script#6karel-brinda wants to merge 1 commit into
karel-brinda wants to merge 1 commit into
Conversation
jkbonfield
added a commit
to samtools/samtools
that referenced
this pull request
Jul 29, 2015
Author: karel-brinda. Untracked in git due to no common ancestor.
jmarshall
pushed a commit
to samtools/samtools
that referenced
this pull request
Aug 21, 2015
[Cherry-picked PR lh3/wgsim#6.]
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
Thank you for creating wgsim!!
This is a minor bug in the evaluation script. When a mapper used operations 'X' and '=' in a CIGAR string instead of 'M', the right coordinate was not computed correctly.