GitHub - ccbio/ScStRNAnalysis

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Name		Name	Last commit message	Last commit date
Latest commit History 11 Commits
1.scRNA_seq_integration.R		1.scRNA_seq_integration.R
2.0.scRNA_seq_reclustering_cell_subsets.R		2.0.scRNA_seq_reclustering_cell_subsets.R
2.1.Trajectory analysis.R		2.1.Trajectory analysis.R
3.scRNA_seq_epithelial_modules.R		3.scRNA_seq_epithelial_modules.R
4.Bulk_RNA_seq_analysis.R		4.Bulk_RNA_seq_analysis.R
5.scRNA_seq_cell_communications.R		5.scRNA_seq_cell_communications.R
6.Spatial_transcriptome_analysis.R		6.Spatial_transcriptome_analysis.R
7.MIF_HMGCR_CholesterolScore.R		7.MIF_HMGCR_CholesterolScore.R
ReadMe.txt		ReadMe.txt

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These codes for analysis singleCell/spatia/bulk RNA sequencing of ESCC in this paper: 
Jing Song, Xiaomei Song, Yue Xie, Hong Guo*, Yupeng Cun*, MIF-expressing tumor cells mediate immunotherapeutic resistance in esophageal squamous cell carcinoma.