The Biological & Environmental Program Integration Center (BioEPIC) will bring together experimental systems like EcoPODs, and modeling frameworks like EcoSIM, adjacent to key informatics and data resources like NMDC, JGI, KBase, and ESS-DIVE. BioEPIC will leverage and go beyond these resources, using innovative AI methods to assist in the extraction and integration of data and simulations.
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- EcoSIM_python_tools Public
bioepic-data/EcoSIM_python_tools’s past year of commit activity - chess-data Public
Download and process CHESS (Catchment Hydrology and Environmental Science Suite) data from ESS-DIVE, mapped to BERVO ontology
bioepic-data/chess-data’s past year of commit activity - trowel Public
TROWEL - a Tool for Retrieving, Organizing, and Wrangling Earth science data and Labels
bioepic-data/trowel’s past year of commit activity - bioepic_skills Public
A Python library designed to simplify various research tasks for users looking to extract and prepare structured data from scientific literature for use with the EcoSIM model.
bioepic-data/bioepic_skills’s past year of commit activity - ecosim-co-scientist Public
A prototype AI-powered research assistant for preparing EcoSIM analyses, generating netCDF files from multiple sources
bioepic-data/ecosim-co-scientist’s past year of commit activity - ess-dive-sfa-datasets Public
bioepic-data/ess-dive-sfa-datasets’s past year of commit activity - .github Public
bioepic-data/.github’s past year of commit activity
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