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  1. taxonomy_bundle taxonomy_bundle Public

    Reproducible microbial bioinformatics pipelines using Snakemake and pixi. Includes initial workflow for querying and downloading data from NCBI/SRA.

    Python 3 1

  2. metawrap_paper metawrap_paper Public

    Forked from bxlab/metawrap_paper

    All data associated with writing the metaWRAP paper - data files, figure-making scripts, figures, and manuscript drafts

    HTML

  3. metaWRAP metaWRAP Public

    Forked from bxlab/metaWRAP

    MetaWRAP - a flexible pipeline for genome-resolved metagenomic data analysis

    Shell

  4. bacLIFE bacLIFE Public

    Forked from Carrion-lab/bacLIFE

    Python