Skip to content

Feature/refactor_MakeInit#121

Open
mraves2 wants to merge 4 commits intodevelopfrom
feature/refactor_MakeInit
Open

Feature/refactor_MakeInit#121
mraves2 wants to merge 4 commits intodevelopfrom
feature/refactor_MakeInit

Conversation

@mraves2
Copy link
Copy Markdown
Collaborator

@mraves2 mraves2 commented Feb 13, 2026

Step MakeInit renamed to ParseSamplesheet. Variable nr_replicates removed from this step.
The only other step that uses nr_replicates is AverageTechReplicates, which will be replaced with EvaluateTics in v3.4.

Comment thread DIMS.nf
Comment on lines +58 to +60
include { ParseSamplesheet } from './CustomModules/DIMS/ParseSamplesheet.nf' params(
preprocessing_scripts_dir:"$params.preprocessing_scripts_dir"
)
Copy link
Copy Markdown

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Remove the params() in the include (see comment in Custom modules #94)

Copy link
Copy Markdown
Collaborator Author

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Changes applied as suggested.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet

Projects

None yet

Development

Successfully merging this pull request may close these issues.

2 participants