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RuleMonkey 3.1.2 released — independent network-free simulator with 177-model parity test suite

Status: Open.

#66 In RuleWorld/nfsim;

· wshlavacek opened on May 2, 2026

Performance: Species observables with count quantifiers (X()=N) re-walk every live complex per output sample — O(complexes × observables × members)

Status: Open.

#65 In RuleWorld/nfsim;

· wshlavacek opened on Apr 30, 2026

NFsim silently ignores include_reactants / exclude_reactants / exclude_products / include_products

Status: Open.

#63 In RuleWorld/nfsim;

· wshlavacek opened on Apr 17, 2026

-bscb appears to be required for reactant-side molecularity enforcement; -cb / complex=>1 is insufficient

Status: Open.

#51 In RuleWorld/nfsim;

· wshlavacek opened on Mar 25, 2026