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switch to Palette for coloring individuals/mutations

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multitrait changes #531

switch to Palette for coloring individuals/mutations
60f7d53
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Codecov / codecov/project succeeded Mar 14, 2026 in 1s

76.27% (+0.55%) compared to 45417d9

View this Pull Request on Codecov

76.27% (+0.55%) compared to 45417d9

Details

Codecov Report

❌ Patch coverage is 74.83176% with 374 lines in your changes missing coverage. Please review.
✅ Project coverage is 76.27%. Comparing base (45417d9) to head (60f7d53).

Files with missing lines Patch % Lines
core/mutation_type.cpp 82.17% 108 Missing ⚠️
core/mutation_run.cpp 76.77% 62 Missing ⚠️
core/haplosome.cpp 66.87% 52 Missing ⚠️
core/mutation_block.cpp 42.85% 48 Missing ⚠️
core/polymorphism.cpp 41.17% 40 Missing ⚠️
core/mutation_run.h 58.62% 36 Missing ⚠️
core/community_eidos.cpp 79.59% 10 Missing ⚠️
core/community.cpp 93.24% 5 Missing ⚠️
core/genomic_element.cpp 50.00% 3 Missing ⚠️
core/haplosome.h 50.00% 2 Missing ⚠️
... and 6 more
Additional details and impacted files

Impacted file tree graph

@@            Coverage Diff             @@
##           master     #531      +/-   ##
==========================================
+ Coverage   75.71%   76.27%   +0.55%     
==========================================
  Files         114      118       +4     
  Lines       72597    77765    +5168     
  Branches    12851    14123    +1272     
==========================================
+ Hits        54969    59315    +4346     
- Misses      17628    18450     +822     
Files with missing lines Coverage Δ
core/chromosome.h 48.87% <100.00%> (+0.38%) ⬆️
core/community.h 100.00% <ø> (ø)
core/genomic_element.h 100.00% <ø> (ø)
core/genomic_element_type.h 100.00% <ø> (ø)
core/individual.cpp 60.45% <ø> (+5.99%) ⬆️
core/individual.h 32.75% <ø> (ø)
core/interaction_type.h 90.32% <ø> (ø)
core/log_file.cpp 29.52% <100.00%> (ø)
core/log_file.h 100.00% <ø> (ø)
core/mutation.cpp 74.08% <ø> (+12.73%) ⬆️
... and 96 more

... and 7 files with indirect coverage changes

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