Release v3.2 (Q1 2026)

What's Changed

• Kpmp 6359 remove old code by @zwright in #198
• add fake data to endpoint by @Dert1129 in #203
• KPMP-6505: placeholder data for spatial transcriptomics by @HaneenT in #204
• KPMP-6538: added code to return the ontology id to cell type mapping by @rlreamy in #205
• Kpmp 6335 fix dupes by @zwright in #206
• update base image by @Dert1129 in #207
• Update changelog by @Dert1129 in #208
• increase version number by @Dert1129 in #210
• Atlas Q1 2026 release by @Dert1129 in #209
• KPMP-6628: fix getRepoDataTypeInformationByParticipant by @HaneenT in #211

Full Changelog: v3.1...v3.2

Release v3.1 (Q4 2025)

What's Changed

• shove a config type with the data types manually by @Dert1129 in #196
• KPMP-6119: return dummy data for ST dataTypeSummaryInformation by @HaneenT in #197
• fix type error and name caches differently by @Dert1129 in #199
• Update changelog.md by @rlreamy in #195
• KPMP-6410: Commented out returning dummy data for ST by @rlreamy in #200
• Release 3.1 by @zwright in #201

Full Changelog: v3.0...v3.1

Release v3.0 (Q3 2025)

What's Changed

• Update build.gradle by @zwright in #164
• Kpmp 6152 new sn table classes by @HaneenT in #165
• modify SN endpoints to accept a newData param by @Dert1129 in #167
• KPMP-6152: add new classes, remove duplicates, add tests by @HaneenT in #169
• KPMP-6153_fix-casting-bug by @Dert1129 in #170
• fix the name of the view by @Dert1129 in #171
• change names of caches by @Dert1129 in #172
• fix endpoints for new SC data by @Dert1129 in #173
• Update SCRNAGeneExpressionSummaryRepository2025.java by @rlreamy in #174
• Kpmp 6138 summary endpoint by @zwright in #175
• KPMP-6137_Nephron_Schematic_2 by @zwright in #177
• Kpmp 6138 fix by @zwright in #176
• add 2025 data to findDataTypesByGene by @Dert1129 in #178
• Edit changelog for release 2.9 by @Dert1129 in #179
• KPMP-6271: Get SN/SC from Db again by @zwright in #180
• KPMP-6273: groups those results by @zwright in #181
• Update ClusterHierarchy2025.java by @rlreamy in #182
• KPMP-6276: fix calls to get link counts by @rlreamy in #183
• Kpmp 6281 ac fix by @zwright in #184
• Q3 atlas release by @Dert1129 in #185
• Update UmapDataService2025.java by @rlreamy in #186
• KPMP-6321: Added in small clusters by @rlreamy in #187
• KPMP-6321: change to union all to keep duplicate rows by @rlreamy in #188
• KPMP-6321: Fix the params for sn find limited by @rlreamy in #189
• KPMP-6321: Move the and clause by @rlreamy in #190
• KPMP-6322: use db col by @zwright in #191
• Kpmp 6322 fix tubes by @zwright in #192
• update changelog with fixes by @Dert1129 in #194
• Q3 Atlas release by @Dert1129 in #193

Full Changelog: v2.8...v3.0

Release v2.8

• Updates to how we calculate the numbers for the tables so it is more data driven

What's Changed

• Update build.gradle by @rlreamy in #158
• Kpmp 5956 update tables by @rlreamy in #159
• KPMP-5956: Called wrong method for link counts by @rlreamy in #160
• Kpmp 6006 add segmentation masks by @rlreamy in #161
• Update changelog.md by @rlreamy in #162
• Release v2.8 by @rlreamy in #163

Full Changelog: v2.6...v2.8

Release v2.6

What's Changed

• Increase version number by @rlreamy in #149
• KPMP-5618: change tissue type to enrollment category by @HaneenT in #150
• implement backend for participant Clincial by @Dert1129 in #151
• change query to add age_binned from participant table by @Dert1129 in #152
• KPMP-5566_add-more-participant-info-to-endpoint by @Dert1129 in #153
• KPMP-5366: update endpoints, remove clinicalData from participant summary by @HaneenT in #154
• KPMP-5392: add primary adjudicated category to participant summary dataset by @HaneenT in #155
• Update changelog.md by @rlreamy in #156
• Release v2.6 (Q4 2024) by @rlreamy in #157

Full Changelog: v2.5...v2.6

Release v2.5

What's Changed

• Update build.gradle by @rlreamy in #142
• KPMP-5467_upgrade-to-java21 by @Dert1129 in #143
• fix env for develop branch by @Dert1129 in #144
• update pegasus-data version in build.gradle file by @Dert1129 in #145
• Atlas 2024 Q3 Release by @zwright in #146
• KPMP-5609: stop double-counting files w >1 DOI by @HaneenT in #147
• Release v2.5 by @rlreamy in #148

Full Changelog: v2.4...v2.5

Release v2.4

What's Changed

• Update build.gradle by @rlreamy in #134
• Create changelog.md by @rlreamy in #135
• KPMP-5138: add ALL count to summaries by @HaneenT in #136
• KPMP-5138: update dataSummary function with correct query by @HaneenT in #137
• Update changelog.md by @rlreamy in #139
• Release v2.4 by @rlreamy in #138
• Update DataSummaryRepository.java by @rlreamy in #140
• Fix for incorrect numbers on atlas home page by @rlreamy in #141

Full Changelog: v2.3.1...v2.4

Release v2.3.1

What's Changed

• Increase version number for next release by @rlreamy in #130
• KPMP-5248_add-imc-technology by @Dert1129 in #131
• KPMP-5355: fix build action by @HaneenT in #132
• Release v2.3.1 by @rlreamy in #133

Full Changelog: v2.3...v2.3.1

Release v2.3

Release for Q1 2024:
Highlights:

• address vulnerabilities in code and docker images
• Minor fixes for regional proteomics data
• Fixed the Participant Report to be as designed

What's Changed

• Kpmp 5070 simplify rp viz by @rlreamy in #117
• Post release activities by @rlreamy in #116
• upgrade image OS by @Dert1129 in #118
• create basic .dockerignore file by @Dert1129 in #119
• Kpmp 4959 update repo participant report by @rlreamy in #120
• pass version property to docker image by @Dert1129 in #121
• KPMP-5135_github-action-build-image by @Dert1129 in #122
• tag image on develop or master branch by @Dert1129 in #123
• KPMP-5101_fix-github-action by @Dert1129 in #124
• KPMP-4861: Update endpoint to return counts for tissue type by @HaneenT in #125
• Kpmp 5130 adj p val by @zwright in #126
• KPMP-5154: add additional geneExpressionValues to feature data by @HaneenT in #127
• KPMP-5178: added query to fetch biomarker counts by @HaneenT in #128
• Release v2.3 by @rlreamy in #129

Full Changelog: v2.2...v2.3

Release v2.2

TLDR;

• Added regional proteomics
• Minor fixes to regional transcriptomics (ability to search on Tubulo-Interstitium)

What's Changed

• KPMP-4430_RP_Counts by @zwright in #98
• Kpmp 4434 rp expression by @zwright in #99
• Kpmp 4442 regional proteomics data table by @rlreamy in #100
• KPMP-4885_get-message-table by @Dert1129 in #101
• KPMP-4885_fix-query by @Dert1129 in #102
• Kpmp 4434 rp expression by @zwright in #103
• Kpmp 4606 rp in pr by @zwright in #104
• remove cache by @Dert1129 in #105
• KPMP-4886: Added application field to graphql query by @HaneenT in #106
• Kpmp 4944 add rp by @zwright in #107
• Kpmp 4953 rp diffex by @zwright in #108
• KPMP-4960: Add regional proteomics for data type dropdown activation by @rlreamy in #109
• Ti fix by @zwright in #110
• Release v2.2 (Q4 2023) by @rlreamy in #111
• Update RTExpressionDataAllSegmentsRepository.java by @rlreamy in #112
• Update RTExpressionDataGTIRepository.java by @rlreamy in #113
• Update RTExpressionDataGTIRepository.java by @rlreamy in #114
• Release v2.2 (Q4 2023 part deux) by @rlreamy in #115

Full Changelog: v2.1...v2.2