Arc schema#3
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pipliggins merged 37 commits intoISARICResearch:mainfrom Mar 23, 2026
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… the current ARC variables
Instead of a list of different input types
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tedinburgh
previously requested changes
Mar 3, 2026
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tedinburgh
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This looks great, thanks @pipliggins
I had a couple of comments on the draft parser script. The only other thing I wanted to check was that I assume the fields marked "TODO: FILL THIS IN" is to be handled downstream, is that correct?
abhidg
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Mar 8, 2026
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Looks good, couple of minor changes; and I'd add some tests.
Use unit utils to get accurate unit names, stop parser adding options for var + var_units as well as the unit-specific variables.
…nse options in parser
abhidg
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Mar 18, 2026
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Looks good! There are a number of places with the missing valueset, they could be in one defined constant, can be done later.
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A workflow which will run on tag to generate an ISARIC-standard long schema and ADTL parser file filled with the current ARC variables.