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@IAWG-CSBC-PSON

Image Analysis Working Group (CSBC/PS-ON)

Image Analysis Working Group of the Cancer Systems Biology Consortium & Physical Sciences-Oncology Network

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  1. hack2022-01-artifacts hack2022-01-artifacts Public

    Challenge 1: Automated Detection of Microscopy Artifacts

    Python 2 1

  2. hack2022-02-segmentation hack2022-02-segmentation Public

    Challenge 2: Towards artefact-robust cell segmentation models

    MATLAB 2

  3. hack2022-08-thumbnails hack2022-08-thumbnails Public

    Challenge 8: Unsupervised thumbnail generation for whole-slide multiplexed microscopy images

    Python 2 1

  4. Segmentation-challenge Segmentation-challenge Public

    Solutions to set of image segmentation challenges

    Jupyter Notebook 1

  5. morpho-type morpho-type Public archive

    Prediction of cell type from morphology features and neighborhood information

    Jupyter Notebook 1 1

  6. registration-challenge registration-challenge Public

    Code to support the registration Hackathon

    Python 1 3

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