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Use copied pipeline file for pipeline input #718

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Merged
yousefmoazzam merged 1 commit into from
May 15, 2026
Merged

Use copied pipeline file for pipeline input #718

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10 changes: 9 additions & 1 deletion httomo/cli.py
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Original file line number Diff line number Diff line change
Expand Up @@ -274,7 +274,15 @@ def run(
PipelineFormat.Json if pipeline_format == "Json" else PipelineFormat.Yaml
)
pipeline_object = generate_pipeline(
in_data_file, pipeline, save_all, method_wrapper_comm, format_enum
in_data_file,
(
httomo.globals.run_out_dir / pipeline.name
if format_enum == PipelineFormat.Yaml
else pipeline
),
save_all,
method_wrapper_comm,
format_enum,
)

if not does_contain_sweep:
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