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Now multi-platform#3

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SamGG wants to merge 12 commits intoCUHIMSR:masterfrom
i-cyto:master
Open

Now multi-platform#3
SamGG wants to merge 12 commits intoCUHIMSR:masterfrom
i-cyto:master

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@SamGG
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@SamGG SamGG commented Mar 30, 2020

Hi,
I changed the following items. I think the file naming is to strict to permit an easy and large use of your tool. A table of files should be easier to manage with Excel. Let me know.
Best.

Replace OS specific directory functions with R functions - avoid any system calls
Add the auto creation of the channels file which avoid the user to create it from scatch - the user only has to remove the unwanted channels

SamGG added 10 commits March 30, 2020 10:15
Replace OS specific directory functions with R functions - avoid any system calls
Add the auto creation of the channels file which avoid the user to create it from scatch - the user only has to remove the unwanted channels
Add functions to create and read a table to allow the user to index/copy/rename FCS files in order to comply with naming convention
Add a HOWTO for beginners
Calculation executed on a dataset of 27 batches x 20 FCS files; some errors at the plots
Thanks to OlivMC for great discussion
Command to remove directory
@tomashhurst
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I tried out @SamGG 's build in i-cyto on windows and it works a treat.

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