EPFL_BP all bin

[xiyuyi]

test EPFL_BP data with all bin

[xiyuyi]

visualizing

[xiyuyi]

chose two alpha, mu values for further calculation.

[xiyuyi]

PyPRIS__Proj_vies_bgSCF2_mu1.0e+08_alpha1.0e-05_pris2_plots_it23001

need to trim Z range

[xiyuyi]

PyPRIS__Proj_vies_bgSCF2_mu5.0e+06_alpha1.0e-05_pris2_plots_it6001

[xiyuyi]

precise results are all bad. now trim PSF

[xiyuyi]

all results were bad. Now try some local test.

[xiyuyi]

now try to use trimmed PSF, but without subtracting the background.
local test.
Use the same parameter set as bgSCF2_mu5.0e+06_alpha1.0e-05, but with 50000 total steps.

[xiyuyi]

submitted cases:

[xiyuyi@login1 PyPRIS_EPFL_BP_binall_hoffman2_set6]$ pwd
/u/scratch/x/xiyuyi/EPFL_BP/PyPRIS_EPFL_BP_binall_hoffman2_set6
[xiyuyi@login1 PyPRIS_EPFL_BP_binall_hoffman2_set6]$ ls
bgSCF2_mu1.0e+07_alpha1.0e-05_thres-11zrange-60to60
bgSCF2_mu1.0e+07_alpha1.0e-06_thres-11zrange-60to60
bgSCF2_mu1.0e+07_alpha1.0e-07_thres-11zrange-60to60
bgSCF2_mu1.0e+07_alpha5.0e-05_thres-11zrange-60to60
bgSCF2_mu5.0e+06_alpha1.0e-05_thres-11zrange-60to60
bgSCF2_mu5.0e+06_alpha1.0e-06_thres-11zrange-60to60
bgSCF2_mu5.0e+06_alpha4.0e-06_thres-11zrange-60to60
bgSCF2_mu5.0e+06_alpha8.0e-06_thres-11zrange-60to60

[xiyuyi]

trim the PSF would affect the back-projection pattern of the residuals. because errors are back-projected through the transpose of the sensing matrix!

Be careful here.

[xiyuyi]

[xiyuyi]

added more with psf that has the background removed. (subtracting 100)

[xiyuyi@login1 PyPRIS_EPFL_BP_binall_hoffman2_set7]$ pwd
/u/scratch/x/xiyuyi/EPFL_BP/PyPRIS_EPFL_BP_binall_hoffman2_set7
[xiyuyi@login1 PyPRIS_EPFL_BP_binall_hoffman2_set7]$
[xiyuyi@login1 PyPRIS_EPFL_BP_binall_hoffman2_set7]$ ls
bgSCF2_mu5.0e+07_alpha1.0e-07_thres-11zrange-60to60
bgSCF2_mu5.0e+07_alpha1.0e-08_thres-11zrange-60to60
bgSCF2_mu5.0e+07_alpha1.0e-09_thres-11zrange-60to60
bgSCF2_mu5.0e+07_alpha5.0e-08_thres-11zrange-60to60
bgSCF2_mu5.0e+07_alpha5.0e-09_thres-11zrange-60to60

[xiyuyi]

terminated all the jobs. because the local test didn't work.

[xiyuyi]

Now do the following:

• reproduce exactly PyPRIS__Proj_vies_bgSCF2_mu1.0e+08_alpha1.0e-05_pris2_plots_it23001.
  submitted and calculating on Hoffman2.
  [xiyuyi@login4 PyPRIS_EPFL_BP_binall_hoffman2_set8]$ pwd
  /u/scratch/x/xiyuyi/EPFL_BP/PyPRIS_EPFL_BP_binall_hoffman2_set8
  [xiyuyi@login4 PyPRIS_EPFL_BP_binall_hoffman2_set8]$ ls
  bgSCF2_mu1.0e+08_alpha1.0e-05_thres-11zrange-60to60
  bgSCF2_mu1.0e+08_alpha1.0e-06_thres-11zrange-60to60
  bgSCF2_mu1.0e+08_alpha5.0e-06_thres-11zrange-60to60

• Push for publication quality figures.