PItools/NAMESPACE at master · vitkl/PItools · GitHub

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# Generated by roxygen2: do not edit by hand

export(browseMIontology)
export(cleanMITAB)
export(edgelist2degree)
export(edgelist2degreeFreq)
export(edgelist2degree_slow)
export(extractInteractors)
export(fullInteractome)
export(humanViralDegree)
export(interSpeciesInteractome)
export(interactorFeatureTypes)
export(lastIntActRelease)
export(loadAllIDProteins)
export(loadBioplex)
export(loadHumanViralPPI)
export(loadIntActFTP)
export(loadMIontology)
export(loadTaxIDAllLower)
export(loadTaxIDProteins)
export(print.RAW_MItab25)
export(print.RAW_MItab25_fullInteractome)
export(print.RAW_MItab25_interSpeciesInteractome)
export(print.RAW_MItab27)
export(print.RAW_MItab27_fullInteractome)
export(print.RAW_MItab27_interSpeciesInteractome)
export(print.clean_MItab25)
export(print.clean_MItab25_fullInteractome)
export(print.clean_MItab25_fullInteractome_subset)
export(print.clean_MItab25_interSpeciesInteractome)
export(print.clean_MItab25_interSpeciesInteractome_subset)
export(print.clean_MItab25_randomInteractome)
export(print.clean_MItab25_subset)
export(print.clean_MItab27)
export(print.clean_MItab27_fullInteractome)
export(print.clean_MItab27_fullInteractome_subset)
export(print.clean_MItab27_interSpeciesInteractome)
export(print.clean_MItab27_interSpeciesInteractome_subset)
export(print.clean_MItab27_subset)
export(queryPSICQUIC)
export(queryPSICQUICrlib)
export(randomInteractome)
export(removeInteractionNoFASTA)
export(removeInteractionObsoleteID)
export(removeSelfLoops)
export(subsetMITABbyID)
export(subsetMITABbyMethod)
export(subsetMITABbyPMIDs)
export(uniqueNinteractions)
export(uniqueNinteractors)
import(Biostrings)
import(PSICQUIC)
import(data.table)
import(ontologyIndex)
importFrom(R.utils,gunzip)
importFrom(R.utils,gzip)
importFrom(downloader,download)
importFrom(gsubfn,strapplyc)
importFrom(httr,GET)
importFrom(httr,headers)
importFrom(jsonlite,fromJSON)