From 8452f2149373d4cf75b8a34e979e4bcf8cf44c96 Mon Sep 17 00:00:00 2001
From: Jeremy lewi <jeremy@lewi.us>
Date: Mon, 16 Mar 2026 17:11:55 -0700
Subject: [PATCH 1/4] Preserve cell output while editing code cells

Signed-off-by: Jeremy lewi <jeremy@lewi.us>
---
 app/src/components/Actions/Actions.test.tsx | 86 +++++++++++++++++++--
 app/src/components/Actions/Actions.tsx      | 16 +++-
 2 files changed, 92 insertions(+), 10 deletions(-)

diff --git a/app/src/components/Actions/Actions.test.tsx b/app/src/components/Actions/Actions.test.tsx
index 31c65965..c1aed769 100644
--- a/app/src/components/Actions/Actions.test.tsx
+++ b/app/src/components/Actions/Actions.test.tsx
@@ -1,14 +1,31 @@
 // @vitest-environment jsdom
-import { describe, expect, it, vi } from "vitest";
+import { beforeEach, describe, expect, it, vi } from "vitest";
 import { render, screen, act, fireEvent } from "@testing-library/react";
 import { clone, create } from "@bufbuild/protobuf";
 import React from "react";
 import { APPKERNEL_RUNNER_NAME, APPKERNEL_RUNNER_LABEL } from "../../lib/runtime/appKernel";
 
-import { parser_pb, RunmeMetadataKey } from "../../runme/client";
+import { MimeType, parser_pb, RunmeMetadataKey } from "../../runme/client";
 import type { CellData } from "../../lib/notebookData";
 import { Action } from "./Actions";
 
+const editorMockState = vi.hoisted(() => ({
+  onChangeHandlers: [] as Array<(value: string) => void>,
+}));
+
+vi.mock("./Editor", () => ({
+  default: ({
+    value,
+    onChange,
+  }: {
+    value: string;
+    onChange: (value: string) => void;
+  }) => {
+    editorMockState.onChangeHandlers.push(onChange);
+    return <textarea data-testid="editor-proxy" readOnly value={value} />;
+  },
+}));
+
 // Minimal mocks for contexts Action consumes
 vi.mock("../../contexts/OutputContext", () => ({
   useOutput: () => ({
@@ -42,6 +59,12 @@ vi.mock("../../contexts/NotebookContext", () => ({
   }),
 }));
 
+vi.mock("../../contexts/NotebookStoreContext", () => ({
+  useNotebookStore: () => ({
+    store: null,
+  }),
+}));
+
 vi.mock("../../contexts/CurrentDocContext", () => ({
   useCurrentDoc: () => ({
     getCurrentDoc: () => null,
@@ -129,6 +152,10 @@ class StubCellData {
 }
 
 describe("Action component", () => {
+  beforeEach(() => {
+    editorMockState.onChangeHandlers.length = 0;
+  });
+
   it("updates CellConsole key when runID changes", async () => {
     const cell =  create(parser_pb.CellSchema,{
       refId: "cell-1",
@@ -140,9 +167,9 @@ describe("Action component", () => {
       },
       value: "echo hi",
     });
-    const stub = new StubCellData(cell) as unknown as CellData;
+    const stub = new StubCellData(cell);
 
-    render(<Action cellData={stub} isFirst={false} />);
+    render(<Action cellData={stub as unknown as CellData} isFirst={false} />);
 
     const first = screen.getByTestId("cell-console") as HTMLElement;
     const firstKey = first.dataset.runkey;
@@ -169,9 +196,9 @@ describe("Action component", () => {
       },
       value: "echo hi",
     });
-    const stub = new StubCellData(cell) as unknown as CellData;
+    const stub = new StubCellData(cell);
 
-    render(<Action cellData={stub} isFirst={false} />);
+    render(<Action cellData={stub as unknown as CellData} isFirst={false} />);
     expect(screen.getByTestId("cell-console")).toBeTruthy();
 
     await act(async () => {
@@ -182,6 +209,53 @@ describe("Action component", () => {
     expect(screen.queryByTestId("cell-console")).toBeNull();
   });
 
+  it("preserves latest outputs when edit callback uses stale closure", async () => {
+    const cell = create(parser_pb.CellSchema, {
+      refId: "cell-stale-closure",
+      kind: parser_pb.CellKind.CODE,
+      languageId: "bash",
+      outputs: [],
+      metadata: {
+        [RunmeMetadataKey.LastRunID]: "run-0",
+      },
+      value: "echo hi",
+    });
+    const stub = new StubCellData(cell) as unknown as CellData;
+
+    render(<Action cellData={stub} isFirst={false} />);
+
+    const staleOnChange = editorMockState.onChangeHandlers[0];
+    expect(staleOnChange).toBeTypeOf("function");
+
+    await act(async () => {
+      const withOutput = clone(parser_pb.CellSchema, stub.snapshot);
+      withOutput.outputs = [
+        create(parser_pb.CellOutputSchema, {
+          items: [
+            create(parser_pb.CellOutputItemSchema, {
+              mime: MimeType.VSCodeNotebookStdOut,
+              type: "Buffer",
+            }),
+          ],
+        }),
+      ];
+      stub.update(withOutput);
+      await Promise.resolve();
+    });
+
+    await act(async () => {
+      staleOnChange?.("echo edited");
+      await Promise.resolve();
+    });
+
+    const latestUpdateCall = stub.update.mock.calls.at(-1);
+    const updatedCell = latestUpdateCall?.[0] as parser_pb.Cell;
+    expect(updatedCell.outputs).toHaveLength(1);
+    expect(updatedCell.outputs[0]?.items[0]?.mime).toBe(
+      MimeType.VSCodeNotebookStdOut,
+    );
+  });
+
   it("shows language selector in markdown edit mode and converts to code language", () => {
     const cell = create(parser_pb.CellSchema, {
       refId: "cell-md",
diff --git a/app/src/components/Actions/Actions.tsx b/app/src/components/Actions/Actions.tsx
index e1be13bb..c64eb8de 100644
--- a/app/src/components/Actions/Actions.tsx
+++ b/app/src/components/Actions/Actions.tsx
@@ -8,7 +8,7 @@ import {
   useSyncExternalStore,
 } from "react";
 
-import { create } from "@bufbuild/protobuf";
+import { clone, create } from "@bufbuild/protobuf";
 import { Button, ScrollArea, Tabs, Text } from "@radix-ui/themes";
 import { useParams } from "react-router-dom";
 
@@ -568,7 +568,11 @@ export function Action({
         return;
       }
 
-      const updatedCell = create(parser_pb.CellSchema, cell);
+      const latestCell = cellData.snapshot;
+      if (!latestCell) {
+        return;
+      }
+      const updatedCell = clone(parser_pb.CellSchema, latestCell);
       if (nextValue === "markdown") {
         setMarkdownEditRequest((request) => request + 1);
         updatedCell.kind = parser_pb.CellKind.MARKUP;
@@ -588,7 +592,7 @@ export function Action({
       setPid(null);
       setExitCode(null);
     },
-    [cell, selectedLanguage, updateCellLocal],
+    [cell, cellData, selectedLanguage, updateCellLocal],
   );
 
   // Determine if this cell is a markdown cell (either MARKUP kind or CODE with markdown language)
@@ -739,7 +743,11 @@ export function Action({
               fontSize={fontSettings.fontSize}
               fontFamily={fontSettings.fontFamily}
               onChange={(v) => {
-                const updated = create(parser_pb.CellSchema, cell);
+                const latestCell = cellData.snapshot;
+                if (!latestCell) {
+                  return;
+                }
+                const updated = clone(parser_pb.CellSchema, latestCell);
                 updated.value = v;
                 updateCellLocal(updated);
               }}

From 65d289f2480330be352f8ef30abe2e5a4c96a56f Mon Sep 17 00:00:00 2001
From: Jeremy lewi <jeremy@lewi.us>
Date: Mon, 16 Mar 2026 17:20:24 -0700
Subject: [PATCH 2/4] Trigger CI rerun

Signed-off-by: Jeremy lewi <jeremy@lewi.us>

From 82913d258117673fd46b069d1949b6ba6ce2bd64 Mon Sep 17 00:00:00 2001
From: Jeremy lewi <jeremy@lewi.us>
Date: Mon, 16 Mar 2026 17:28:54 -0700
Subject: [PATCH 3/4] Trigger CI rerun 2

Signed-off-by: Jeremy lewi <jeremy@lewi.us>

From 0c1277ddd8130426fdd908df57171b0516ee153f Mon Sep 17 00:00:00 2001
From: Jeremy lewi <jeremy@lewi.us>
Date: Mon, 16 Mar 2026 17:37:51 -0700
Subject: [PATCH 4/4] Tighten Action regression test stub typing

Signed-off-by: Jeremy lewi <jeremy@lewi.us>
---
 app/src/components/Actions/Actions.test.tsx | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/app/src/components/Actions/Actions.test.tsx b/app/src/components/Actions/Actions.test.tsx
index c1aed769..94a0c684 100644
--- a/app/src/components/Actions/Actions.test.tsx
+++ b/app/src/components/Actions/Actions.test.tsx
@@ -220,9 +220,9 @@ describe("Action component", () => {
       },
       value: "echo hi",
     });
-    const stub = new StubCellData(cell) as unknown as CellData;
+    const stub = new StubCellData(cell);
 
-    render(<Action cellData={stub} isFirst={false} />);
+    render(<Action cellData={stub as unknown as CellData} isFirst={false} />);
 
     const staleOnChange = editorMockState.onChangeHandlers[0];
     expect(staleOnChange).toBeTypeOf("function");