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dag_graph.py
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162 lines (128 loc) · 5.18 KB
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"""Internal DAG implementation used by pytask."""
from __future__ import annotations
import itertools
from dataclasses import dataclass
from dataclasses import field
from typing import TYPE_CHECKING
from typing import Any
from typing import cast
from _pytask.compat import import_optional_dependency
from _pytask.node_protocols import PNode
from _pytask.node_protocols import PProvisionalNode
from _pytask.node_protocols import PTask
if TYPE_CHECKING:
from collections.abc import Callable
from collections.abc import Iterable
from collections.abc import Iterator
from collections.abc import Mapping
DAGEntry = PTask | PNode | PProvisionalNode
class NoCycleError(Exception):
"""Raised when no cycle is found in a graph."""
@dataclass
class DAG:
"""A minimal directed graph tailored to pytask's needs."""
_node_data: dict[str, DAGEntry] = field(default_factory=dict)
_successors: dict[str, set[str]] = field(default_factory=dict)
_predecessors: dict[str, set[str]] = field(default_factory=dict)
@property
def nodes(self) -> dict[str, DAGEntry]:
return self._node_data
def add_node(self, node_name: str, data: DAGEntry) -> None:
if node_name not in self._node_data:
self._successors[node_name] = set()
self._predecessors[node_name] = set()
self._node_data[node_name] = data
def add_edge(self, source: str, target: str) -> None:
if source not in self._node_data or target not in self._node_data:
msg = "Both nodes must exist before adding an edge."
raise KeyError(msg)
self._successors[source].add(target)
self._predecessors[target].add(source)
def successors(self, node: str) -> Iterator[str]:
return iter(self._successors[node])
def predecessors(self, node: str) -> Iterator[str]:
return iter(self._predecessors[node])
def in_degree(self) -> Iterator[tuple[str, int]]:
for node, predecessors_ in self._predecessors.items():
yield node, len(predecessors_)
def remove_nodes_from(self, nodes: Iterable[str]) -> None:
for node in nodes:
if node not in self._node_data:
continue
for predecessor in tuple(self._predecessors[node]):
self._successors[predecessor].discard(node)
for successor in tuple(self._successors[node]):
self._predecessors[successor].discard(node)
del self._node_data[node]
del self._successors[node]
del self._predecessors[node]
def descendants(self, node: str) -> set[str]:
"""Return all descendants of a node."""
return self._traverse(node, self.successors)
def ancestors(self, node: str) -> set[str]:
"""Return all ancestors of a node."""
return self._traverse(node, self.predecessors)
def relabel_nodes(self, mapping: Mapping[str, str]) -> DAG:
graph = DAG()
new_labels = [mapping.get(node, node) for node in self._node_data]
if len(new_labels) != len(set(new_labels)):
msg = "Relabeling nodes requires unique target labels."
raise ValueError(msg)
for node, data in self._node_data.items():
graph.add_node(mapping.get(node, node), data)
for source, successors in self._successors.items():
new_source = mapping.get(source, source)
for target in successors:
graph.add_edge(new_source, mapping.get(target, target))
return graph
def to_networkx(self) -> Any:
nx = cast("Any", import_optional_dependency("networkx"))
graph = nx.DiGraph()
for node in self._node_data:
graph.add_node(node)
for source, successors in self._successors.items():
for target in successors:
graph.add_edge(source, target)
return graph
def _traverse(
self,
node: str,
adjacency: Callable[[str], Iterable[str]],
) -> set[str]:
visited: set[str] = set()
stack = list(adjacency(node))
while stack:
current = stack.pop()
if current in visited:
continue
visited.add(current)
stack.extend(adjacency(current))
return visited
def find_cycle(dag: DAG) -> list[tuple[str, str]]:
"""Find one cycle in the graph."""
visited: set[str] = set()
active: set[str] = set()
path: list[str] = []
def _visit(node: str) -> list[tuple[str, str]] | None:
visited.add(node)
active.add(node)
path.append(node)
for successor in dag.successors(node):
if successor not in visited:
cycle = _visit(successor)
if cycle is not None:
return cycle
elif successor in active:
start = path.index(successor)
cycle_nodes = [*path[start:], successor]
return list(itertools.pairwise(cycle_nodes))
active.remove(node)
path.pop()
return None
for node in dag.nodes:
if node in visited:
continue
cycle = _visit(node)
if cycle is not None:
return cycle
raise NoCycleError