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01_run.py
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194 lines (157 loc) · 7.08 KB
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import torch
import torch.nn as nn
import argparse
import torchvision.transforms as transforms
from torchvision.datasets import ImageFolder
from torch.utils.data import Dataset, DataLoader
import os
import matplotlib.pyplot as plt
from torchvision.transforms import RandomHorizontalFlip, RandomRotation
from torch.utils import tensorboard
from torchvision import models
import util
import training
from model.ResNet_relu import ResNet, Bottleneck
import gc
DEBUG = True
k_fold = 5
seed = 42
util.fix_seed(seed)
print('pytorch version: {}'.format(torch.__version__))
print('GPU 사용 가능 여부: {}'.format(torch.cuda.is_available()))
device = "cuda" if torch.cuda.is_available() else "cpu" # GPU 사용 가능 여부에 따라 device 정보 저장
# argparse
config = argparse.ArgumentParser()
config.add_argument("--batch_size", default=4, type=int)
config.add_argument("--lr", default=0.0005, type=float)
config.add_argument("--gpus", default="0", type=str)
config.add_argument("--epoch", default=100, type=int)
config.add_argument("--earlystop_patience", default=10, type=int)
config.add_argument("--train_size", default=0.8, type=float)
config.add_argument("--val_size", default=0.2, type=float)
config.add_argument("--num_classes", default=3, type=int)
config.add_argument("--model", default="ResNet_P", type=str)
config = config.parse_args()
data_dir = f"working\\kfold{k_fold}_seed{seed}"
# 폴드 데이터셋이 준비되어있지 않으면 생성하기
if not os.path.exists(data_dir):
util.split_KFold('Dataset_BUSI_with_GT', k_fold=k_fold, seed=seed)
if DEBUG:
util.datadir_check(data_dir)
for fold in range(k_fold):
fold_data_dir = os.path.join(data_dir, f"fold_{fold}")
print("============================================")
print(f"====== K Fold Validation step => {fold}/{k_fold} =======")
print("============================================")
# Define the minority classes in your dataset
class_names = ['malignant', 'normal', 'benign']
minority_classes = ['malignant', 'normal']
# Define data transformations for train, validation, and test sets
data_transforms = {
'train': transforms.Compose([
transforms.Resize((400, 400)),
transforms.Grayscale(num_output_channels=1),
RandomHorizontalFlip(p=0.5),
RandomRotation(30, expand=False, center=None),
transforms.ToTensor(),
transforms.Normalize([83.63/255], [9.16/255])
]),
'validation': transforms.Compose([
transforms.Resize((300, 300)),
transforms.Grayscale(num_output_channels=1),
transforms.ToTensor(),
transforms.Normalize([83.63/255], [9.16/255])
])
}
# Create datasets for train, validation
image_datasets = {
x: ImageFolder(
root=os.path.join(fold_data_dir, x),
transform=data_transforms[x]
)
for x in ['train', 'validation']
}
# Create dataloaders for train, validation, and test
dataloaders = {x: DataLoader(image_datasets[x], batch_size=config.batch_size, shuffle=True, num_workers=4)
for x in ['train', 'validation']}
# Calculate dataset sizes
dataset_sizes = {x: len(image_datasets[x]) for x in ['train', 'validation']}
# Get class labels
class_names = image_datasets['train'].classes
# Print dataset sizes and class labels
print("Dataset Sizes:", dataset_sizes)
print("Class Labels:", class_names)
######
# 모델 가져오기
######
if config.model == 'ResNet':
model = ResNet(Bottleneck, [3, 4, 23, 3], num_classes=len(class_names))
elif config.model == 'ResNet_P':
model = models.resnet101(pretrained=True)
# 첫 번째 컨볼루션 레이어 수정
model.conv1 = nn.Conv2d(1, 64, kernel_size=7, stride=2, padding=3, bias=False)
# 마지막 레이어 수정
num_ftrs = model.fc.in_features
model.fc = nn.Linear(num_ftrs, len(class_names))
else:
model = config.model(num_classes=len(class_names))
model = model.to(device)
trainer = training.Trainer(config, model, device)
stopping_check = float('inf')
patience = 0
checkpoint_score = 0
# tensorboard 로그 기록
writer = tensorboard.SummaryWriter(f"./logs/{config.model}_fold{fold + 1}_batch{config.batch_size}_lr{config.lr}(relu,weighted, Momentum0.9, 400)")
# 에포크별 학습 진행
for epoch in range(config.epoch):
train_result = trainer.train(epoch, image_datasets['train'])
eval_result, c_mat = trainer.eval(epoch, image_datasets['validation'])
# tensorboard for training result
writer.add_scalar("loss/train", train_result["loss"], epoch)
writer.add_scalar("acc/train", train_result["acc"], epoch)
writer.add_scalar("precision/train", train_result["precision"], epoch)
writer.add_scalar("recall/train", train_result["recall"], epoch)
writer.add_scalar("f1-score/train", train_result["f1"], epoch)
# tensorboard for validation result
writer.add_scalar("loss/val", eval_result["loss"], epoch)
writer.add_scalar("acc/val", eval_result["acc"], epoch)
writer.add_scalar("precision/val", eval_result["precision"], epoch)
writer.add_scalar("recall/val", eval_result["recall"], epoch)
writer.add_scalar("f1-score/val", eval_result["f1"], epoch)
# # 결과 출력
# print(f"{epoch} train result:", train_result)
# print(f"{epoch} val result:", eval_result)
# 결과 출력
print(f"{epoch} train result: loss: {train_result['loss']:.5f}, acc: {train_result['acc']:.5f}")
print(f"{epoch} val result: loss: {eval_result['loss']:.5f}, acc: {eval_result['acc']:.5f}")
# tensorboard for confusion matrix
ax = util.plot_confusion_matrix(c_mat.cpu().numpy())
cm = ax.get_figure()
if not os.path.exists("./confusion_matrix"):
os.makedirs("./confusion_matrix")
eval_acc = eval_result["acc"]
eval_loss = eval_result["loss"]
plt.savefig(
f"./confusion_matrix/epoch{epoch}_{config.model}_fold{fold + 1}_batch{config.batch_size}_lr{config.lr}_acc{eval_acc:.2f}.png")
writer.add_figure("Confusion Matrix", cm, epoch)
if stopping_check < eval_loss:
patience += 1
else:
patience = 0
stopping_check = eval_loss
if not os.path.exists("./output"):
os.makedirs("./output")
if checkpoint_score < eval_acc:
torch.save(trainer.model.state_dict(),
f"./output/epoch{epoch}_{config.model}_fold{fold + 1}_batch{config.batch_size}_lr{config.lr}_acc{eval_acc:.2f}.ckpt")
torch.save(
c_mat,
f"./confusion_matrix/epoch{epoch}_{config.model}_fold{fold + 1}_batch{config.batch_size}_lr{config.lr}_acc{eval_acc:.2f}.pth")
if patience == config.earlystop_patience:
print("early stopping at", epoch)
break
writer.close()
del image_datasets, dataloaders
gc.collect()
torch.cuda.empty_cache() # GPU 메모리 해제
break