Skip to content

automatically infer strandedness #33

@iraiosub

Description

@iraiosub

some protocols/kits generate reverse stranded libraries. these reads need to be reverse-complemented before BLAT. Implementation: infer strandedness with RSeQC's infer experiment script, and if strand is "-", reverse complement the reads.

Metadata

Metadata

Assignees

Labels

enhancementNew feature or request

Projects

No projects

Milestone

No milestone

Relationships

None yet

Development

No branches or pull requests

Issue actions