Dear Author,
I have used BaseVar on 5 BAM files, each approximately 3GB in size, but it requires a substantial amount of memory to run successfully, specifically up to 400GB. I would like to know if I am running it correctly. The command I used is as follows:
basevar basetype --reference "reference/GCA_000003025.6_Sscrofa11.1_genomic.fa"
--input bam.list --output pig --batch 5 --thread 32
Dear Author,
I have used BaseVar on 5 BAM files, each approximately 3GB in size, but it requires a substantial amount of memory to run successfully, specifically up to 400GB. I would like to know if I am running it correctly. The command I used is as follows: