PhenoGen/CurrentDataSets.jsp at master · Vanderll/PhenoGen · GitHub

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<%@ include file="/web/access/include/login_vars.jsp" %>
<%@ include file="/web/common/basicHeader.jsp" %>
<div style="margin:10px;">
<a name="Mouse">
<a href="#Mouse">Mouse</a><%=tenSpaces%><a href="#Rat">Rat</a><%=tenSpaces%><a href="index.jsp">Home</a>
<BR> <BR>
<table class="list_base" style="border:1px solid;" cellpadding="9" cellspacing="9">
 <tr> <th colspan="5"> <h2><center>Mus Musculus</center></h2></th> </tr>
 <tr class="title"> <th colspan="5"> <h3>Inbred Strains</h3></th> </tr>
 <tr class="title">
  <th width="10%"> Number of Strains </th>
  <th width="10%"> Type of Samples </th>
  <th width="10%"> Number of Arrays Per Strain </th>
  <th width="20%"> Array </th>
  <th width="50%"> Strains </th>
 </tr>
 <tr>
  <td class="center"> 28 </td>
  <td> whole brain from adult male mice </td>
  <td class="center"> 4 to 6 </td>
  <td> Affymetrix Mouse 430 version 2 (targeted to 3' UTR) </td>
  <td> 129P3/J, 129S1/SvImJ, 129X1/SvJ, A/J, AKR/J, Balb/cJ, BTBR T+tf/J, Balb/cByJ, C3H/HeJ, C57BL/6J, C58/J, CAST/EiJ, CBA/J, DBA/2J, FVB/NJ, ILS, ISS, KK/H1J, LP/J, Molf/EiJ, NOD/LtJ, NZO/HILtJ, NZW/LacJ, PWD/PhJ, PWK/PhJ, SJL/J, SPRET/EiJ, WSB/EiJ </td>
 </tr>
 <tr>
  <td class="center"> 4 </td>
  <td> whole brain from adult male mice </td>
  <td class="center"> 6 to 36 </td>
  <td> Affymetrix Mouse Exon Array </td>
  <td> C57BL/6J, DBA/2J, ILS, ISS </td>
 </tr>
 <tr class="title"> <th colspan="5"> <h3>Recombinant Inbred Panels</h3></th> </tr>
 <tr class="title">
  <th width="10%"> Number of Strains </th>
  <th width="10%"> Type of Samples </th>
  <th width="10%"> Number of Arrays Per Strain </th>
  <th width="20%"> Array </th>
  <th width="50%"> Strains </th>
 </tr>
 <tr>
  <td class="center"> 32 </td>
  <td> whole brain from adult male mice </td>
  <td class="center"> 4 to 7 </td>
  <td> Affymetrix Mouse 430 version 2 (targeted to 3' UTR) </td>
  <td> BXD1, BXD2, BXD5, BXD6, BXD8, BXD9, BXD11, BXD12, BXD13, BXD14, BXD15, BXD16, BXD18, BXD19, BXD21, BXD22, BXD23, BXD24, BXD27, BXD28, BXD29, BXD31, BXD32, BXD33, BXD34, BXD36, BXD38, BXD39, BXD40, BXD42, DBA, C57 </td>
 </tr>
 <tr>
  <td class="center"> 61 </td>
  <td> whole brain from adult male mice </td>
  <td class="center"> 4 to 6 </td>
  <td> Affymetrix Mouse Exon Array </td>
  <td> LXS100, LXS101, LXS102, LXS103, LXS107, LXS110, LXS112, LXS114, LXS115, LXS122, LXS123, LXS13, LXS14, LXS16, LXS19, LXS22, LXS23, LXS24, LXS25, LXS26, LXS28, LXS3, LXS32, LXS34, LXS36, LXS39, LXS41, LXS42, LXS43, LXS46, LXS48,  LXS5, LXS50, LXS52, LXS60, LXS64, LXS66, LXS7, LXS70, LXS72, LXS73, LXS75, LXS76, LXS78, LXS8, LXS80, LXS84, LXS86, LXS87, LXS89, LXS9, LXS90, LXS92, LXS93, LXS94, LXS96, LXS97, LXS98, LXS99, ILS, ISS </td>
 </tr>
  <tr class="title"> <th colspan="5"> <h3>Selected Lines</h3></th> </tr>
 <tr class="title">
  <th width="10%"> Number of Pairs </th>
  <th width="10%"> Type of Samples </th>
  <th width="10%"> Number of Arrays Per Line </th>
  <th width="20%"> Array </th>
  <th width="50%"> Lines </th>
 </tr>
 <tr>
  <td class="center"> 7 </td>
  <td> whole brain from adult male mice </td>
  <td class="center"> 4 to 6 </td>
  <td> Affymetrix Mouse 430 version 2 (targeted to 3' UTR) </td>
  <td> HAFT1/LAFT1, HAFT2/LAFT2, HAP1/LAP1, HAP2/LAP2, HAP3/LAP3, iHAFT/iLAFT, ILS/ISS </td>
 </tr>
  <tr class="title"> <th colspan="5"> <h3>Genetically Modified Animals</h3></th> </tr>
 </tr>
 <tr class="title">
  <th> Number of Pairs </th>
  <th> Type of Samples </th>
  <th> Number of Arrays Per Group </th>
  <th> Array </th>
  <th> Modifications </th>
 </tr>
 <tr>
  <td class="center"> 8 </td>
  <td> multiple </td>
  <td class="center"> 3 to 6 </td>
  <td> Affymetrix Mouse 430 version 2 (targeted to 3' UTR) </td>
  <td> Fyn KO, Maob KO, Maoa KO, Maoa and Maob KO, P14TCR transgenic, Spinophilin KO, AC7 transgentic, AC7 KO
  </td>
 </tr>
</table>

<BR> <BR>
<a name="Rat">
<a href="#Mouse">Mouse</a><%=tenSpaces%><a href="#Rat">Rat</a><%=tenSpaces%><a href="index.jsp">Home</a>
<BR> <BR>
<table class="list_base" style="border:1px solid;" cellpadding="9" cellspacing="9">
 <tr> <th colspan="5"> <h2><center>Rattus Norvegicus</center></h2></th> </tr>
 <tr class="title"> <th colspan="5"> <h3>Inbred Strains (Cells and Tissues)</h3></th> </tr>
 <tr class="title">
  <th width="10%"> Number of Strains </th>
  <th width="10%"> Type of Samples </th>
  <th width="10%"> Number of Arrays Per Strain </th>
  <th width="20%"> Array </th>
  <th width="50%"> Strains </th>
 </tr>
 <tr>
  <td class="center"> 3 </td>
  <td> whole brain from adult male rats </td>
  <td class="center"> 4 to 6 </td>
  <td> CodeLink Whole Genome Rat Array </td>
  <td> BN-Lx/CubPrin, SHR/OlaPrin, SHR-Lx/CubPrin </td>
 </tr>
 <tr>
  <td class="center"> 6 </td>
  <td> whole brain from adult male rats </td>
  <td class="center"> 4 </td>
  <td> Affymetrix Rat Exon Array </td>
  <td> BN-Lx/CubPrin, PD/CubPrin, SHR/NCrlPrin, SHR/OlaPrin, SHR-Lx/CubPrin, WKY/NCrlPrin </td>
 </tr>
 <tr>
  <td class="center"> 6 </td>
  <td> heart - left ventrical from adult male rats </td>
  <td class="center"> 4 </td>
  <td> Affymetrix Rat Exon Array </td>
  <td> BN-Lx/CubPrin, PD/CubPrin, SHR/NCrlPrin, SHR/OlaPrin, SHR-Lx/CubPrin, WKY/NCrlPrin </td>
 </tr>
 <tr>
  <td class="center"> 6 </td>
  <td> liver from adult male rats </td>
  <td class="center"> 4 </td>
  <td> Affymetrix Rat Exon Array </td>
  <td> BN-Lx/CubPrin, PD/CubPrin, SHR/NCrlPrin, SHR/OlaPrin, SHR-Lx/CubPrin, WKY/NCrlPrin </td>
 </tr>
 <tr>
  <td class="center"> 6 </td>
  <td> brown fat from adult male rats </td>
  <td class="center"> 4 </td>
  <td> Affymetrix Rat Exon Array </td>
  <td> BN-Lx/CubPrin, PD/CubPrin, SHR/NCrlPrin, SHR/OlaPrin, SHR-Lx/CubPrin, WKY/NCrlPrin </td>
 </tr>
 <tr>
  <td class="center"> 4 </td>
  <td> Kupffer cells from liver (fresh/cultured/MACS) </td>
  <td class="center"> 4 </td>
  <td> Affymetrix Rat Exon Array </td>
  <td> BN-Lx/CubPrin, PD/CubPrin, SHR/NCrlPrin, SHR/OlaPrin </td>
 </tr>
 <tr>
  <td class="center"> 4 </td>
  <td> Hepatic Stellate cells from liver (fresh) </td>
  <td class="center"> 4 </td>
  <td> Affymetrix Rat Exon Array </td>
  <td> BN-Lx/CubPrin, PD/CubPrin, SHR/NCrlPrin, SHR/OlaPrin </td>
 </tr>
 <tr>
  <td class="center"> 4 </td>
  <td> hepatocyte cells from liver (fresh/cultured) </td>
  <td class="center"> 4 </td>
  <td> Affymetrix Rat Exon Array </td>
  <td> BN-Lx/CubPrin, PD/CubPrin, SHR/NCrlPrin, SHR/OlaPrin </td>
 </tr>
 <tr>
  <td class="center"> 4 </td>
  <td> sinusoidal edotheliad cells from liver (fresh/cultured) </td>
  <td class="center"> 4 </td>
  <td> Affymetrix Rat Exon Array </td>
  <td> BN-Lx/CubPrin, PD/CubPrin, SHR/NCrlPrin, SHR/OlaPrin </td>
 </tr>
 <tr class="title"> <th colspan="5"> <h3>Recombinant Inbred Panels</h3></th> </tr>
 <tr class="title">
  <th width="10%"> Number of Strains </th>
  <th width="10%"> Type of Samples </th>
  <th width="10%"> Number of Arrays Per Strain </th>
  <th width="20%"> Array </th>
  <th width="50%"> Strains </th>
 </tr>
 <tr>
  <td class="center"> 28 </td>
  <td> whole brain from adult male rats </td>
  <td class="center"> 4 to 6 </td>
  <td> CodeLink Whole Genome Rat Array </td>
  <td> BN-Lx/CubPrin, BXH08, BXH10, BXH11, BXH12, BXH13, BXH5, BXH6, BXH8, BXH9, HXB1, HXB10, HXB13, HXB15, HXB17, HXB18, HXB2, HXB20, HXB23, HXB25, HXB26, HXB27, HXB29, HXB3, HXB31, HXB4, HXB7, SHR/OlaPrin </td>
 </tr>
 <tr>
  <td class="center"> 23 </td>
  <td> whole brain from adult male rats </td>
  <td class="center"> 3 to 4 </td>
  <td> Affymetrix Rat Exon Array </td>
  <td> BN-Lx/CubPrin, BXH08, BXH10, BXH11, BXH13, BXH6, HXB1, HXB10, HXB13, HXB15, HXB17, HXB18, HXB2, HXB23, HXB25, HXB26, HXB27, HXB29, HXB3, HXB31, HXB4, HXB7, SHR/OlaPrin </td>
 </tr>
 <tr>
  <td class="center"> 23 </td>
  <td> heart - left ventrical from adult male rats </td>
  <td class="center"> 3 to 4 </td>
  <td> Affymetrix Rat Exon Array </td>
  <td> BN-Lx/CubPrin, BXH08, BXH10, BXH11, BXH13, BXH6, HXB1, HXB10, HXB13, HXB15, HXB17, HXB18, HXB2, HXB23, HXB25, HXB26, HXB27, HXB29, HXB3, HXB31, HXB4, HXB7, SHR/OlaPrin </td>
 </tr>
 <tr>
  <td class="center"> 23 </td>
  <td> liver from adult male rats </td>
  <td class="center"> 3 to 4 </td>
  <td> Affymetrix Rat Exon Array </td>
  <td> BN-Lx/CubPrin, BXH08, BXH10, BXH11, BXH13, BXH6, HXB1, HXB10, HXB13, HXB15, HXB17, HXB18, HXB2, HXB23, HXB25, HXB26, HXB27, HXB29, HXB3, HXB31, HXB4, HXB7, SHR/OlaPrin </td>
 </tr>
 <tr>
  <td class="center"> 21 </td>
  <td> brown fat from adult male rats </td>
  <td class="center"> 3 to 4 </td>
  <td> Affymetrix Rat Exon Array </td>
  <td> BN-Lx/CubPrin, BXH08, BXH10, BXH11, BXH13, BXH6, HXB10, HXB13, HXB15, HXB17, HXB18, HXB2, HXB23, HXB25, HXB26, HXB27, HXB29, HXB3, HXB4, HXB7, SHR/OlaPrin </td>
 </tr>
 <tr>
  <td>&nbsp;  </td>
  <td>&nbsp;  </td>
  <td>&nbsp;  </td>
  <td>&nbsp;  </td>
  <td>&nbsp;  </td>
 </tr>
  <tr class="title"> <th colspan="5"> <h3>Selected Lines</h3></th> </tr>
 <tr class="title">
  <th width="10%"> Number of Pairs </th>
  <th width="10%"> Type of Samples </th>
  <th width="10%"> Number of Arrays Per Line </th>
  <th width="20%"> Array </th>
  <th width="50%"> Lines </th>
 </tr>
 <tr>
  <td class="center"> 8 </td>
  <td> whole brain from adult male rats </td>
  <td class="center"> 4 to 6 </td>
  <td> CodeLink Whole Genome Rat Array </td>
  <td> AA/ANA, HAD1/LAD1, HAD2/LAD2, IHAS1/ILAS1, IHAS2/ILAS2, P/NP, sP/sNP, UChB/UChA </td>
 </tr>
 <tr>
  <td class="center"> 6 </td>
  <td> whole brain from adult male rats </td>
  <td class="center"> 4 to 6 </td>
  <td> Affymetrix Rat Exon Array </td>
  <td> AA/ANA, HAD1/LAD1, HAD2/LAD2, P/NP, sP/sNP, UChB/UChA </td>
 </tr>

</table>
</div>
	<%@ include file="/web/common/basicFooter.jsp" %>