[Workflow Telemetry] AxiosError

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AxiosError: Request failed with status code 403

[Workflow Telemetry] AxiosError

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AxiosError: Request failed with status code 403

[Workflow Telemetry] AxiosError

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AxiosError: Request failed with status code 403

[Workflow Telemetry] AxiosError

Process completed with exit code 1.

Build process failed

Vignette re-building failed.

processing vignette 'cell_type_specific_epigenomics.Rmd' failed with diagnostics:

--- re-building 'cell_type_specific_epigenomics.Rmd' using rmarkdown

[Workflow Telemetry] AxiosError

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AxiosError: Request failed with status code 403

[Workflow Telemetry] AxiosError

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AxiosError: Request failed with status code 403

[Workflow Telemetry] AxiosError

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AxiosError: Request failed with status code 403

[Workflow Telemetry] AxiosError

Error: connect ECONNREFUSED 127.0.0.1:7777

[Workflow Telemetry] Error

[Workflow Telemetry] Unable to report stat collector result

Error: connect ECONNREFUSED 127.0.0.1:7777

[Workflow Telemetry] Error

[Workflow Telemetry] Unable to finish stat collector

Process completed with exit code 1.

Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: actions/cache@v4, actions/checkout@v4, actions/upload-artifact@v4, catchpoint/workflow-telemetry-action@v2, r-lib/actions/setup-pandoc@v2, r-lib/actions/setup-r@v2. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/

No files were found with the provided path: check. No artifacts will be uploaded.

dependency 'BiocVersion' is not available

Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: actions/cache@v4, actions/checkout@v4, catchpoint/workflow-telemetry-action@v2, r-lib/actions/setup-pandoc@v2, r-lib/actions/setup-r@v2. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/

'fin' may be used uninitialized [-Wmaybe-uninitialized]

Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]

Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]

Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]

Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]

Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]

Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]

dependencies ‘BiocVersion’, ‘BiocStyle’ are not available

fribidi 1.0.16 is already installed and up-to-date. To reinstall 1.0.16, run: brew reinstall fribidi

harfbuzz 12.3.2 is already installed and up-to-date. To reinstall 12.3.2, run: brew reinstall harfbuzz