diff --git a/AGENTS.md b/AGENTS.md index 7382123b..12935104 100644 --- a/AGENTS.md +++ b/AGENTS.md @@ -40,7 +40,7 @@ Activate the local virtualenv before running any Python/uv commands: `source .ve ## Testing Guidelines - Frameworks: `pytest` and `pytest-asyncio`. -- Place tests in `tests/`; name files `test_*.py`. +- Place tests in `tests/`; name files `*_test.py`. - Run locally with `pytest` before opening a PR (CI runs lint + integration tests). ## Pull Request Guidelines diff --git a/VULNERABILITIES.md b/VULNERABILITIES.md new file mode 100644 index 00000000..197d3177 --- /dev/null +++ b/VULNERABILITIES.md @@ -0,0 +1,53 @@ +# Vulnerability Update Guide + +Use this file when updating dependency floors in [pyproject.toml](pyproject.toml) to address vulnerability findings. + +## Rules + +1. Keep the dependency line and its vulnerability note together. + Example: + ```toml + "requests>=2.33.0", + # ⬆️ Required to fix vulnerability CVE-2026-25645 + ``` + The up-arrow comment goes immediately below the package line, not above it. + +2. Mention only the advisory that necessitates the current minimum version. + If `authlib>=1.6.11` is required because `GHSA-jj8c-mmj3-mmgv` is the first fix at that floor, mention only that advisory. + Do not list older advisories that are also fixed incidentally by the same newer version. + +3. Do not keep stale version-history commentary. + Keep only the final package floor and the advisory tied to that floor. + +4. Treat major-version upgrades as compatibility risks. + Before keeping a major bump such as `transformers` or `pytest`, add or run tests that exercise the affected public SDK behavior. + +5. Prefer the smallest safe version bump that clears the finding. + If a vulnerability is fixed in `46.0.6`, do not cite it as justification for `46.0.7` unless `46.0.7` is required by another active finding. + +## Workflow + +1. Update the minimum version in `pyproject.toml`. +2. Place the vulnerability comment immediately below the changed dependency line. +3. Recompile the dependency set from `pyproject.toml`. + Example: + ```bash + UV_CACHE_DIR=/tmp/uv-cache uv pip compile pyproject.toml --group dev --group docs --group deploy --extra pandas --extra polars --extra transformers -o /tmp/hirundo-all-requirements.txt + ``` +4. Audit the compiled output. + Example: + ```bash + UV_CACHE_DIR=/tmp/uv-cache uv run pip-audit --no-deps --disable-pip -r /tmp/hirundo-all-requirements.txt -f json + ``` +5. Run validation for compatibility-sensitive changes. + Commands: + ```bash + .venv/bin/pytest + .venv/bin/basedpyright + ``` + +## Repo-specific notes + +- This repository has many integration-heavy tests that require credentials such as `AWS_ACCESS_KEY`, `GCP_CREDENTIALS`, and `HUGGINGFACE_ACCESS_TOKEN`. +- If full `pytest` is unavailable because credentials are missing, report that explicitly and run any safe targeted tests that cover the changed behavior. +- For `transformers` changes, keep coverage on the Hugging Face pipeline path in [tests/unlearning-llm/llm_pipeline_transformers_test.py](tests/unlearning-llm/llm_pipeline_transformers_test.py). diff --git a/docs/hirundo.cli.rst b/docs/hirundo.cli.rst index bb23b1ef..614b1613 100644 --- a/docs/hirundo.cli.rst +++ b/docs/hirundo.cli.rst @@ -1,5 +1,5 @@ .. meta:: - :http-equiv=Content-Security-Policy: default-src 'self', frame-ancestors 'none' + :http-equiv=Content-Security-Policy: default-src 'self'; frame-ancestors 'none' hirundo.cli module ================== diff --git a/docs/hirundo.dataset_enum.rst b/docs/hirundo.dataset_enum.rst index 1bc75105..44432cd8 100644 --- a/docs/hirundo.dataset_enum.rst +++ b/docs/hirundo.dataset_enum.rst @@ -1,5 +1,5 @@ .. meta:: - :http-equiv=Content-Security-Policy: default-src 'self', frame-ancestors 'none' + :http-equiv=Content-Security-Policy: default-src 'self'; frame-ancestors 'none' hirundo.dataset_enum module =========================== diff --git a/docs/hirundo.dataset_qa.rst b/docs/hirundo.dataset_qa.rst index 62c7960a..d2883b34 100644 --- a/docs/hirundo.dataset_qa.rst +++ b/docs/hirundo.dataset_qa.rst @@ -1,5 +1,5 @@ .. meta:: - :http-equiv=Content-Security-Policy: default-src 'self', frame-ancestors 'none' + :http-equiv=Content-Security-Policy: default-src 'self'; frame-ancestors 'none' hirundo.dataset_qa module ========================= diff --git a/docs/hirundo.dataset_qa_results.rst b/docs/hirundo.dataset_qa_results.rst index 491ddd95..a4586d73 100644 --- a/docs/hirundo.dataset_qa_results.rst +++ b/docs/hirundo.dataset_qa_results.rst @@ -1,5 +1,5 @@ .. meta:: - :http-equiv=Content-Security-Policy: default-src 'self', frame-ancestors 'none' + :http-equiv=Content-Security-Policy: default-src 'self'; frame-ancestors 'none' hirundo.dataset_qa_results module ================================= diff --git a/docs/hirundo.git.rst b/docs/hirundo.git.rst index bdc11ffa..dc78ab8d 100644 --- a/docs/hirundo.git.rst +++ b/docs/hirundo.git.rst @@ -1,5 +1,5 @@ .. meta:: - :http-equiv=Content-Security-Policy: default-src 'self', frame-ancestors 'none' + :http-equiv=Content-Security-Policy: default-src 'self'; frame-ancestors 'none' hirundo.git module ================== diff --git a/docs/hirundo.labeling.rst b/docs/hirundo.labeling.rst index 49eff245..e4c92193 100644 --- a/docs/hirundo.labeling.rst +++ b/docs/hirundo.labeling.rst @@ -1,5 +1,5 @@ .. meta:: - :http-equiv=Content-Security-Policy: default-src 'self', frame-ancestors 'none' + :http-equiv=Content-Security-Policy: default-src 'self'; frame-ancestors 'none' hirundo.labeling module ======================= diff --git a/docs/hirundo.llm_behavior_eval.rst b/docs/hirundo.llm_behavior_eval.rst index 500b4c4f..1ee7e4b9 100644 --- a/docs/hirundo.llm_behavior_eval.rst +++ b/docs/hirundo.llm_behavior_eval.rst @@ -1,5 +1,5 @@ .. meta:: - :http-equiv=Content-Security-Policy: default-src 'self', frame-ancestors 'none' + :http-equiv=Content-Security-Policy: default-src 'self'; frame-ancestors 'none' hirundo.llm_behavior_eval module ============================= diff --git a/docs/hirundo.llm_behavior_eval_results.rst b/docs/hirundo.llm_behavior_eval_results.rst index 61a30892..c2901fcf 100644 --- a/docs/hirundo.llm_behavior_eval_results.rst +++ b/docs/hirundo.llm_behavior_eval_results.rst @@ -1,5 +1,5 @@ .. meta:: - :http-equiv=Content-Security-Policy: default-src 'self', frame-ancestors 'none' + :http-equiv=Content-Security-Policy: default-src 'self'; frame-ancestors 'none' hirundo.llm_behavior_eval_results module ============================= diff --git a/docs/hirundo.llm_bias_type.rst b/docs/hirundo.llm_bias_type.rst index 54a39208..720bf8f5 100644 --- a/docs/hirundo.llm_bias_type.rst +++ b/docs/hirundo.llm_bias_type.rst @@ -1,5 +1,5 @@ .. meta:: - :http-equiv=Content-Security-Policy: default-src 'self', frame-ancestors 'none' + :http-equiv=Content-Security-Policy: default-src 'self'; frame-ancestors 'none' hirundo.llm_bias_type module ============================= diff --git a/docs/hirundo.logger.rst b/docs/hirundo.logger.rst index fcfb5949..0253e380 100644 --- a/docs/hirundo.logger.rst +++ b/docs/hirundo.logger.rst @@ -1,5 +1,5 @@ .. meta:: - :http-equiv=Content-Security-Policy: default-src 'self', frame-ancestors 'none' + :http-equiv=Content-Security-Policy: default-src 'self'; frame-ancestors 'none' hirundo.logger module ===================== diff --git a/docs/hirundo.rst b/docs/hirundo.rst index 214fa564..cffd3426 100644 --- a/docs/hirundo.rst +++ b/docs/hirundo.rst @@ -1,5 +1,5 @@ .. meta:: - :http-equiv=Content-Security-Policy: default-src 'self', frame-ancestors 'none' + :http-equiv=Content-Security-Policy: default-src 'self'; frame-ancestors 'none' hirundo package =============== diff --git a/docs/hirundo.storage.rst b/docs/hirundo.storage.rst index 633a4d72..7938c339 100644 --- a/docs/hirundo.storage.rst +++ b/docs/hirundo.storage.rst @@ -1,5 +1,5 @@ .. meta:: - :http-equiv=Content-Security-Policy: default-src 'self', frame-ancestors 'none' + :http-equiv=Content-Security-Policy: default-src 'self'; frame-ancestors 'none' hirundo.storage module ====================== diff --git a/docs/hirundo.unlearning_llm.rst b/docs/hirundo.unlearning_llm.rst index 986e4a92..3f805883 100644 --- a/docs/hirundo.unlearning_llm.rst +++ b/docs/hirundo.unlearning_llm.rst @@ -1,5 +1,5 @@ .. meta:: - :http-equiv=Content-Security-Policy: default-src 'self', frame-ancestors 'none' + :http-equiv=Content-Security-Policy: default-src 'self'; frame-ancestors 'none' hirundo.unlearning_llm module ============================= diff --git a/docs/hirundo.unzip.rst b/docs/hirundo.unzip.rst index b7621f25..29e005b7 100644 --- a/docs/hirundo.unzip.rst +++ b/docs/hirundo.unzip.rst @@ -1,5 +1,5 @@ .. meta:: - :http-equiv=Content-Security-Policy: default-src 'self', frame-ancestors 'none' + :http-equiv=Content-Security-Policy: default-src 'self'; frame-ancestors 'none' hirundo.unzip module ==================== diff --git a/docs/index.rst b/docs/index.rst index 0841e123..858b638e 100644 --- a/docs/index.rst +++ b/docs/index.rst @@ -4,7 +4,7 @@ contain the root `toctree` directive. .. meta:: - :http-equiv=Content-Security-Policy: default-src 'self', frame-ancestors 'none' + :http-equiv=Content-Security-Policy: default-src 'self'; frame-ancestors 'none' Hirundo Python SDK ================== diff --git a/docs/modules.rst b/docs/modules.rst index 35fd28e6..e4163154 100644 --- a/docs/modules.rst +++ b/docs/modules.rst @@ -1,5 +1,5 @@ .. meta:: - :http-equiv=Content-Security-Policy: default-src 'self', frame-ancestors 'none' + :http-equiv=Content-Security-Policy: default-src 'self'; frame-ancestors 'none' hirundo ======= diff --git a/pyproject.toml b/pyproject.toml index c246471e..10f5d7ba 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -31,9 +31,9 @@ dependencies = [ "httpx-sse>=0.4.0", "tqdm>=4.66.5", "h11>=0.16.0", + "requests>=2.33.0", # ⬆️ Required to fix vulnerability GHSA-vqfr-h8mv-ghfj - "requests>=2.32.4", - # ⬆️ Required to fix vulnerability GHSA-9hjg-9r4m-mvj7 + # ⬆️ Required to fix vulnerability CVE-2026-25645 "urllib3>=2.6.3", # ⬆️ Required to fix vulnerability CVE-2026-21441 "setuptools>=78.1.1", @@ -51,7 +51,12 @@ Homepage = "https://github.com/Hirundo-io/hirundo-python-sdk" [project.optional-dependencies] pandas = ["pandas>=2.2.3"] polars = ["polars>=1.0.0"] -transformers = ["transformers>=4.57.3", "peft>=0.18.1", "accelerate>=1.12.0"] +transformers = [ + "transformers>=5.0.0rc3", + # ⬆️ Required to fix vulnerability CVE-2026-1839 + "peft>=0.18.1", + "accelerate>=1.12.0", +] [dependency-groups] dev = [ @@ -59,20 +64,21 @@ dev = [ "numpy>=2.1.3; sys_platform == 'darwin'", # ⬆️ Ensure macOS runners resolve a NumPy version with prebuilt wheels in `pytest_sanity`. "types-setuptools>=69.5.0", - "pytest>=8.2.0", + "pytest>=9.0.3", + # ⬆️ Required to fix vulnerability CVE-2025-71176 "pytest-asyncio>=0.23.6", - "uv>=0.9.29", + "uv>=0.11.6", + # ⬆️ Required to fix vulnerability GHSA-pjjw-68hj-v9mw "pre-commit>=3.7.1", "basedpyright==1.37.1", "virtualenv>=20.36.1", - # ⬆️ Needed for `pre-commit` version fix for vulnerability GHSA-rqc4-2hc7-8c8v - "authlib>=1.6.6", - # ⬆️ Required to fix vulnerability CVE-2025-68158 + "authlib>=1.6.11", + # ⬆️ Required to fix vulnerability GHSA-jj8c-mmj3-mmgv "ruff>=0.12.0", "bumpver>=2025.1131", "platformdirs>=4.3.6", - "cryptography>=46.0.5", - # ⬆️ Required to fix vulnerability CVE-2026-26007 + "cryptography>=46.0.7", + # ⬆️ Required to fix vulnerability CVE-2026-39892 "jinja2>=3.1.6", # ⬆️ Required to fix vulnerabilities GHSA-cpwx-vrp4-4pq7 , GHSA-gmj6-6f8f-6699 & GHSA-q2x7-8rv6-6q7h "filelock>=3.20.3", diff --git a/tests/unlearning-llm/llm_pipeline_transformers_test.py b/tests/unlearning-llm/llm_pipeline_transformers_test.py new file mode 100644 index 00000000..ba4e5adf --- /dev/null +++ b/tests/unlearning-llm/llm_pipeline_transformers_test.py @@ -0,0 +1,240 @@ +import io +import zipfile +from typing import Any + +import pytest +from hirundo._llm_pipeline import get_hf_pipeline_for_run_given_model +from hirundo._llm_sources import HuggingFaceTransformersModel +from hirundo.unlearning_llm import LlmModel, LlmUnlearningRun + +pytest.importorskip("peft") +pytest.importorskip("transformers") + + +class FakeResponse: + def __init__(self, payload: bytes): + self.payload = payload + + def __enter__(self) -> "FakeResponse": + return self + + def __exit__(self, exc_type, exc, tb) -> None: + return None + + def raise_for_status(self) -> None: + return None + + def iter_content(self, chunk_size: int) -> list[bytes]: + del chunk_size + return [self.payload] + + +class FakeTokenizer: + def __init__(self) -> None: + self.pad_token = None + self.eos_token = "".join(["<", "eos", ">"]) + + +class FakeConfig: + def __init__(self, model_type: str): + self.model_type = model_type + + def to_dict(self) -> dict[str, str]: + return {"model_type": self.model_type} + + +@pytest.fixture +def adapter_zip_bytes() -> bytes: + zip_buffer = io.BytesIO() + with zipfile.ZipFile(zip_buffer, "w") as zip_file: + zip_file.writestr("unlearned_model_folder/adapter_config.json", "{}") + return zip_buffer.getvalue() + + +def test_text_generation_pipeline_uses_transformers_loader_api( + monkeypatch: pytest.MonkeyPatch, adapter_zip_bytes: bytes +) -> None: + tokenizer = FakeTokenizer() + config = FakeConfig(model_type="not-multimodal") + base_model = object() + peft_model = object() + pipeline_result = object() + tokenizer_calls: list[dict[str, Any]] = [] + config_calls: list[dict[str, Any]] = [] + causal_lm_calls: list[dict[str, Any]] = [] + peft_calls: list[tuple[object, str]] = [] + pipeline_calls: list[dict[str, Any]] = [] + + def fake_requests_get(*args: Any, **kwargs: Any) -> FakeResponse: + del args, kwargs + return FakeResponse(adapter_zip_bytes) + + def fake_tokenizer_from_pretrained(*args: Any, **kwargs: Any) -> FakeTokenizer: + tokenizer_calls.append({"args": args, "kwargs": kwargs}) + return tokenizer + + def fake_config_from_pretrained(*args: Any, **kwargs: Any) -> FakeConfig: + config_calls.append({"args": args, "kwargs": kwargs}) + return config + + def fake_causal_lm_from_pretrained(*args: Any, **kwargs: Any) -> object: + causal_lm_calls.append({"args": args, "kwargs": kwargs}) + return base_model + + def fake_peft_from_pretrained(model: object, path: str) -> object: + peft_calls.append((model, path)) + return peft_model + + def fake_pipeline(**kwargs: Any) -> object: + pipeline_calls.append(kwargs) + return pipeline_result + + monkeypatch.setattr( + LlmUnlearningRun, + "check_run_by_id", + lambda run_id: {"result": "https://example.invalid/adapter.zip"}, + ) + monkeypatch.setattr("hirundo._llm_pipeline.requests.get", fake_requests_get) + + from peft import PeftModel + from transformers.models.auto.configuration_auto import AutoConfig + from transformers.models.auto.modeling_auto import AutoModelForCausalLM + from transformers.models.auto.tokenization_auto import AutoTokenizer + + monkeypatch.setattr( + AutoTokenizer, "from_pretrained", fake_tokenizer_from_pretrained + ) + monkeypatch.setattr(AutoConfig, "from_pretrained", fake_config_from_pretrained) + monkeypatch.setattr( + AutoModelForCausalLM, "from_pretrained", fake_causal_lm_from_pretrained + ) + monkeypatch.setattr(PeftModel, "from_pretrained", fake_peft_from_pretrained) + monkeypatch.setattr("transformers.pipelines.pipeline", fake_pipeline) + monkeypatch.setattr("hirundo._llm_pipeline.pipeline", fake_pipeline, raising=False) + + llm = LlmModel( + model_name="demo-model", + model_source=HuggingFaceTransformersModel( + model_name="org/demo-model", + token="-".join(["hf", "token"]), + ), + ) + + pipeline_output = get_hf_pipeline_for_run_given_model( + llm, + "run-123", + device="cpu", + device_map="auto", + trust_remote_code=True, + ) + + assert pipeline_output is pipeline_result + assert tokenizer.pad_token == tokenizer.eos_token + assert tokenizer_calls == [ + { + "args": ("org/demo-model",), + "kwargs": { + "token": "-".join(["hf", "token"]), + "trust_remote_code": True, + }, + } + ] + assert config_calls == [ + { + "args": ("org/demo-model",), + "kwargs": { + "token": "-".join(["hf", "token"]), + "trust_remote_code": True, + }, + } + ] + assert causal_lm_calls == [ + { + "args": ("org/demo-model",), + "kwargs": { + "token": "-".join(["hf", "token"]), + "trust_remote_code": True, + }, + } + ] + assert peft_calls and peft_calls[0][0] is base_model + assert peft_calls[0][1].endswith("/unlearned_model_folder") + assert pipeline_calls == [ + { + "task": "text-generation", + "model": peft_model, + "tokenizer": tokenizer, + "config": config, + "device": "cpu", + "device_map": "auto", + } + ] + + +def test_multimodal_pipeline_uses_image_text_loader_when_model_type_matches( + monkeypatch: pytest.MonkeyPatch, adapter_zip_bytes: bytes +) -> None: + from transformers.models.auto.modeling_auto import ( + MODEL_FOR_IMAGE_TEXT_TO_TEXT_MAPPING_NAMES, + ) + + multimodal_model_type = next(iter(MODEL_FOR_IMAGE_TEXT_TO_TEXT_MAPPING_NAMES)) + tokenizer = FakeTokenizer() + config = FakeConfig(model_type=multimodal_model_type) + multimodal_base_model = object() + peft_model = object() + pipeline_result = object() + multimodal_calls: list[dict[str, Any]] = [] + + def fake_requests_get(*args: Any, **kwargs: Any) -> FakeResponse: + del args, kwargs + return FakeResponse(adapter_zip_bytes) + + monkeypatch.setattr( + LlmUnlearningRun, + "check_run_by_id", + lambda run_id: {"result": "https://example.invalid/adapter.zip"}, + ) + monkeypatch.setattr("hirundo._llm_pipeline.requests.get", fake_requests_get) + + from peft import PeftModel + from transformers.models.auto.configuration_auto import AutoConfig + from transformers.models.auto.modeling_auto import AutoModelForImageTextToText + from transformers.models.auto.tokenization_auto import AutoTokenizer + + monkeypatch.setattr( + AutoTokenizer, "from_pretrained", lambda *args, **kwargs: tokenizer + ) + monkeypatch.setattr(AutoConfig, "from_pretrained", lambda *args, **kwargs: config) + monkeypatch.setattr( + AutoModelForImageTextToText, + "from_pretrained", + lambda *args, **kwargs: ( + multimodal_calls.append({"args": args, "kwargs": kwargs}) + or multimodal_base_model + ), + ) + monkeypatch.setattr(PeftModel, "from_pretrained", lambda model, path: peft_model) + monkeypatch.setattr( + "transformers.pipelines.pipeline", lambda **kwargs: pipeline_result + ) + monkeypatch.setattr( + "hirundo._llm_pipeline.pipeline", + lambda **kwargs: pipeline_result, + raising=False, + ) + + llm = LlmModel( + model_name="demo-model", + model_source=HuggingFaceTransformersModel(model_name="org/demo-model"), + ) + + pipeline_output = get_hf_pipeline_for_run_given_model(llm, "run-123") + + assert pipeline_output is pipeline_result + assert multimodal_calls == [ + { + "args": ("org/demo-model",), + "kwargs": {"token": None, "trust_remote_code": False}, + } + ] diff --git a/uv.lock b/uv.lock index 4937fdfd..672f26ec 100644 --- a/uv.lock +++ b/uv.lock @@ -83,14 +83,15 @@ wheels = [ [[package]] name = "authlib" -version = "1.6.6" +version = "1.7.0" source = { registry = "https://pypi.org/simple" } dependencies = [ { name = "cryptography" }, + { name = "joserfc" }, ] -sdist = { url = "https://files.pythonhosted.org/packages/bb/9b/b1661026ff24bc641b76b78c5222d614776b0c085bcfdac9bd15a1cb4b35/authlib-1.6.6.tar.gz", hash = "sha256:45770e8e056d0f283451d9996fbb59b70d45722b45d854d58f32878d0a40c38e", size = 164894, upload-time = "2025-12-12T08:01:41.464Z" } +sdist = { url = "https://files.pythonhosted.org/packages/d9/82/4d0603f30c1b4629b1f091bb266b0d7986434891d6940a8c87f8098db24e/authlib-1.7.0.tar.gz", hash = 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