It would be very helpful if ProbABEL could take VCF as input. VCF has become one of the most useful formats for genotype data, particularly as the Michigan imputation server is providing results this way. Imputation results are getting larger due to expanded reference panels, so that the MLDOSE format with one individual per row can be cumbersome as it requires all data to be read in before proceeding with regression analyses.
It would be very helpful if ProbABEL could take VCF as input. VCF has become one of the most useful formats for genotype data, particularly as the Michigan imputation server is providing results this way. Imputation results are getting larger due to expanded reference panels, so that the MLDOSE format with one individual per row can be cumbersome as it requires all data to be read in before proceeding with regression analyses.