packages.bib

@Article{anikin2019saos,
    title = {{soundgen: an open-source tool for synthesizing nonverbal vocalizations}},
    author = {Andrey Anikin},
    journal = {Behavior Research Methods},
    year = {2019},
    pages = {778--792},
    volume = {51},
    number = {2},
    doi = {10.3758/s13428-018-1095-7},
}

@Manual{R-av,
  title = {{av: Working with Audio and Video in R}},
  author = {Jeroen Ooms},
  year = {2022},
  note = {R package version 0.7.0},
  url = {https://CRAN.R-project.org/package=av},
}

@Manual{R-base,
  title = {{R: A Language and Environment for Statistical Computing}},
  author = {{R Core Team}},
  organization = {R Foundation for Statistical Computing},
  address = {Vienna, Austria},
  year = {2021},
  url = {https://www.R-project.org/},
}

@Manual{R-cleanNLP,
  title = {{cleanNLP: A Tidy Data Model for Natural Language Processing}},
  author = {Taylor B. Arnold},
  year = {2020},
  note = {R package version 3.0.3},
  url = {https://statsmaths.github.io/cleanNLP/},
}

@Misc{R-chromaR,
  title = {{Exploring chromatic storytelling in movies with R}},
  author = {Buonocore, Tommaso},
  year = {2019},
  url = {https://towardsdatascience.com/exploringchromatic-storytelling-with-r-part-1-8e9ddf8d4187}
}

@Manual{R-coreNLP,
  title = {{coreNLP: Wrappers around Stanford CoreNLP Tools}},
  author = {Taylor Arnold and Lauren Tilton},
  year = {2016},
  note = {R package version 0.4-2},
  url = {https://CRAN.R-project.org/package=coreNLP},
}

@Manual{R-corpus,
  title = {{corpus: Text Corpus Analysis}},
  author = {Patrick O. Perry},
  year = {2021},
  note = {R package version 0.10.2},
  url = {https://CRAN.R-project.org/package=corpus},
}

@Manual{R-DescTools,
    title = {{DescTools: Tools for Descriptive Statistics}},
    author = {Signorell {Andri et mult. al.}},
    year = {2021},
    note = {R package version 0.99.43},
    url = {https://cran.r-project.org/package=DescTools},
  }

@Manual{R-devtools,
  title = {{devtools: Tools to Make Developing R Packages Easier}},
  author = {Hadley Wickham and Jim Hester and Winston Chang and Jennifer Bryan},
  year = {2021},
  note = {R package version 2.4.3},
  url = {https://CRAN.R-project.org/package=devtools},
}

@Manual{R-entropy,
    title = {{entropy: Estimation of Entropy, Mutual Information and Related Quantities}},
    author = {Jean Hausser and Korbinian Strimmer},
    year = {2021},
    note = {R package version 1.3.1},
    url = {https://CRAN.R-project.org/package=entropy},
  }

@Article{R-circlize,
    title = {{circlize implements and enhances circular visualization in R}},
    author = {Zuguang Gu and Lei Gu and Roland Eils and Matthias Schlesner and Benedikt Brors},
    journal = {Bioinformatics},
    volume = {30},
    issue = {19},
    pages = {2811-2812},
    year = {2014},
}

@Manual{R-factoextra,
    title = {{factoextra: Extract and Visualize the Results of Multivariate Data Analyses}},
    author = {Alboukadel Kassambara and Fabian Mundt},
    year = {2020},
    note = {R package version 1.0.7},
    url = {https://CRAN.R-project.org/package=factoextra},
 }
 
@Manual{R-farver,
  title = {{farver: High Performance Colour Space Manipulation}},
  author = {Thomas Lin Pedersen and Berendea Nicolae and Romain François},
  year = {2021},
  note = {R package version 2.1.0},
  url = {https://CRAN.R-project.org/package=farver},
}

@Manual{R-fpc,
  title = {{fpc: Flexible Procedures for Clustering}},
  author = {Christian Hennig},
  year = {2020},
  note = {R package version 2.2-9},
  url = {https://www.unibo.it/sitoweb/christian.hennig/en/},
}

@Manual{R-GDAtools,
    title = {{GDAtools: A Toolbox for Geometric Data Analysis and More}},
    author = {Nicolas Robette},
    year = {2022},
    note = {R package version 1.7.2},
    url = {https://CRAN.R-project.org/package=GDAtools},
  }

@Manual{R-ggdendro,
    title = {{ggdendro: Create Dendrograms and Tree Diagrams Using 'ggplot2'}},
    author = {Andrie {de Vries} and Brian D. Ripley},
    year = {2022},
    note = {R package version 0.1.23},
    url = {https://CRAN.R-project.org/package=ggdendro},
}

@Manual{R-ggpubr,
  title = {{ggpubr: ggplot2 Based Publication Ready Plots}},
  author = {Alboukadel Kassambara},
  year = {2020},
  note = {R package version 0.4.0},
  url = {https://rpkgs.datanovia.com/ggpubr/},
}

@Manual{R-ggrepel,
    title = {{ggrepel: Automatically Position Non-Overlapping Text Labels with ggplot2}},
    author = {Kamil Slowikowski},
    year = {2021},
    note = {R package version 0.9.1},
    url = {https://CRAN.R-project.org/package=ggrepel},
  }

@Manual{R-ggridges,
  title = {{ggridges: Ridgeline Plots in ggplot2}},
  author = {Claus O. Wilke},
  year = {2021},
  note = {R package version 0.5.3},
  url = {https://wilkelab.org/ggridges/},
}

@Manual{R-here,
  title = {{here: A Simpler Way to Find Your Files}},
  author = {Kirill Müller},
  year = {2020},
  note = {R package version 1.0.1},
  url = {https://CRAN.R-project.org/package=here},
}

@Manual{R-Hmisc,
  title = {{Hmisc: Harrell Miscellaneous}},
  author = {Harrell, Jr., Frank E},
  year = {2021},
  note = {R package version 4.6-0},
  url = {https://hbiostat.org/R/Hmisc/},
}

@Manual{R-imager,
  title = {{imager: Image Processing Library Based on CImg}},
  author = {Simon Barthelme},
  year = {2022},
  note = {R package version 0.42.13},
  url = {https://CRAN.R-project.org/package=imager},
}

@Article{le2008fapf,
    title = {{FactoMineR}: A Package for Multivariate Analysis},
    author = {S\'ebastien L\^e and Julie Josse and Fran\c{c}ois Husson},
    journal = {Journal of Statistical Software},
    year = {2008},
    volume = {25},
    number = {1},
    pages = {1--18},
    doi = {10.18637/jss.v025.i01},
}

@Manual{R-lexicon,
    title = {{lexicon: Lexicon Data}},
    author = {Tyler W. Rinker},
    note = {version 1.2.1},
    year = {2018},
    url = {http://github.com/trinker/lexicon},
  }

@Manual{R-pacman,
  title = {{pacman: Package Management Tool}},
  author = {Tyler Rinker and Dason Kurkiewicz},
  year = {2019},
  note = {R package version 0.5.1},
  url = {https://github.com/trinker/pacman},
}

@Manual{R-pheatmap,
    title = {{pheatmap: Pretty Heatmaps}},
    author = {Raivo Kolde},
    year = {2019},
    note = {R package version 1.0.12},
    url = {https://CRAN.R-project.org/package=pheatmap},
  }

@Manual{R-plotly,
  title = {{plotly: Create Interactive Web Graphics via plotly.js}},
  author = {Carson Sievert and Chris Parmer and Toby Hocking and Scott Chamberlain and Karthik Ram and Marianne Corvellec and Pedro Despouy},
  year = {2021},
  note = {R package version 4.10.0},
  url = {https://CRAN.R-project.org/package=plotly},
}

@Manual{R-robustbase,
  title = {{robustbase: Basic Robust Statistics}},
  author = {Valentin Todorov and Andreas Ruckstuhl and Matias Salibian-Barrera and Tobias Verbeke and Manuel Koller and Martin Maechler},
  year = {2021},
  note = {R package version 0.93-9},
  url = {https://robustbase.R-forge.R-project.org/},
}

@Manual{R-Rutils,
    title = {{R.utils: Various Programming Utilities}},
    author = {Henrik Bengtsson},
    year = {2022},
    note = {R package version 2.12.0},
    url = {https://CRAN.R-project.org/package=R.utils},
  }

@Manual{R-scales,
    title = {{scales: Scale Functions for Visualization}},
    author = {Hadley Wickham and Dana Seidel},
    year = {2020},
    note = {R package version 1.1.1},
    url = {https://CRAN.R-project.org/package=scales},
}

@Manual{R-seewave,
  title = {{seewave: Sound Analysis and Synthesis}},
  author = {Jerome Sueur and Thierry Aubin and Caroline Simonis},
  year = {2022},
  note = {R package version 2.2.0},
  url = {https://rug.mnhn.fr/seewave/},
}

@Manual{R-SentimentAnalysis,
    title = {{SentimentAnalysis: Dictionary-Based Sentiment Analysis}},
    author = {Nicolas Proellochs and Stefan Feuerriegel},
    year = {2021},
    note = {R package version 1.3-4},
    url = {https://CRAN.R-project.org/package=SentimentAnalysis},
  }

@Manual{R-sentimentr,
  title = {{sentimentr: Calculate Text Polarity Sentiment}},
  author = {Tyler Rinker},
  year = {2021},
  note = {R package version 2.9.0},
  url = {https://github.com/trinker/sentimentr},
}

@Manual{R-srt,
  title = {{srt: Read Subtitle Files as Tabular Data}},
  author = {Kiernan Nicholls},
  year = {2021},
  note = {R package version 1.0.3},
  url = {https://CRAN.R-project.org/package=srt},
}

@Manual{R-stringr,
    title = {{stringr: Simple, Consistent Wrappers for Common String Operations}},
    author = {Hadley Wickham},
    year = {2019},
    note = {R package version 1.4.0},
    url = {https://CRAN.R-project.org/package=stringr},
  }

@Manual{R-stylo,
  title = {stylo: Stylometric Multivariate Analyses},
  author = {Maciej Eder and Jan Rybicki and Mike Kestemont and Steffen Pielstroem},
  year = {2020},
  note = {R package version 0.7.4},
  url = {https://github.com/computationalstylistics/stylo},
}

@Manual{R-subtools,
    title = {{subtools: Read and Manipulate Video Subtitles}},
    author = {Francois Keck},
    year = {2019},
    note = {R package version 1.0},
  }

@Manual{R-syuzhet,
  title = {{syuzhet: Extracts Sentiment and Sentiment-Derived Plot Arcs from Text}},
  author = {Matthew Jockers},
  year = {2020},
  note = {R package version 1.0.6},
  url = {https://github.com/mjockers/syuzhet},
}

@Manual{R-textclean,
    title = {{textclean: Text Cleaning Tools}},
    author = {Tyler W. Rinker},
    note = {version 0.9.3},
    year = {2018},
    url = {https://github.com/trinker/textclean},
}

@Manual{R-textdata,
  title = {{textdata: Download and Load Various Text Datasets}},
  author = {Emil Hvitfeldt},
  year = {2022},
  note = {R package version 0.4.2},
  url = {https://github.com/EmilHvitfeldt/textdata},
}

@Manual{R-tidytext,
  title = {{tidytext: Text Mining using dplyr, ggplot2, and Other Tidy Tools}},
  author = {David Robinson and Julia Silge},
  year = {2022},
  note = {R package version 0.3.3},
  url = {https://github.com/juliasilge/tidytext},
}

@Manual{R-tidyverse,
  title = {{tidyverse: Easily Install and Load the Tidyverse}},
  author = {Hadley Wickham},
  year = {2021},
  note = {R package version 1.3.1},
  url = {https://CRAN.R-project.org/package=tidyverse},
}

@Manual{R-tm,
  title = {{tm: Text Mining Package}},
  author = {Ingo Feinerer and Kurt Hornik},
  year = {2020},
  note = {R package version 0.7-8},
  url = {http://tm.r-forge.r-project.org/},
}

@Manual{R-topicmodels,
  title = {{topicmodels: Topic Models}},
  author = {Bettina Grün and Kurt Hornik},
  year = {2021},
  note = {R package version 0.2-12},
  url = {https://CRAN.R-project.org/package=topicmodels},
}

@Manual{R-treemapify,
  title = {{treemapify: Draw Treemaps in ggplot2}},
  author = {David Wilkins},
  year = {2021},
  note = {R package version 2.5.5},
  url = {https://wilkox.org/treemapify/},
}

@Manual{R-tuneR,
  title = {{tuneR: Analysis of Music and Speech}},
  author = {Uwe Ligges},
  year = {2021},
  note = {R package version 1.3.3.1},
  url = {https://CRAN.R-project.org/package=tuneR},
}

@Manual{R-vader,
  title = {{vader: Valence Aware Dictionary and sEntiment Reasoner (VADER)}},
  author = {Katherine Roehrick},
  year = {2020},
  note = {R package version 0.2.1},
  url = {https://CRAN.R-project.org/package=vader},
}

@Manual{R-viridis,
  title = {{viridis: Colorblind-Friendly Color Maps for R}},
  author = {Simon Garnier},
  year = {2021},
  note = {R package version 0.6.2},
  url = {https://CRAN.R-project.org/package=viridis},
}

@Manual{R-withr,
    title = {{withr: Run Code 'With' Temporarily Modified Global State}},
    author = {Jim Hester and Lionel Henry and Kirill Müller and Kevin Ushey and Hadley Wickham and Winston Chang},
    year = {2022},
    note = {R package version 2.5.0},
    url = {https://CRAN.R-project.org/package=withr},
  }

@Manual{pacman2018,
  title = {{pacman: Package Management for R}},
  author = {Tyler W. Rinker and Dason Kurkiewicz},
  address = {Buffalo, New York},
  note = {version 0.5.0},
  year = {2018},
  url = {http://github.com/trinker/pacman},
}

@Article{ardia2021trps,
    title = {{The R Package sentometrics to compute, aggregate, and predict with textual sentiment}},
    author = {David Ardia and Keven Bluteau and Samuel Borms and Kris Boudt},
    journal = {Journal of Statistical Software},
    year = {2021},
    volume = {99},
    number = {2},
    pages = {1--40},
    doi = {10.18637/jss.v099.i02},
  }

@article{arayasalas2017warp,
	title = {{warbleR: An R Package to Streamline Analysis of Animal Acoustic Signals}},
	volume = {8},
	doi = {10.1111/2041-210X.12624},
	number = {2},
	journal = {Methods in Ecology and Evolution},
	author = {Araya‐Salas, Marcelo and Smith‐Vidaurre, Grace},
	year = {2017},
	pages = {184--191},
}

@Article{benoit2018qarp,
    title = {{quanteda: An R Package for the Quantitative Analysis of Textual Data}},
    journal = {Journal of Open Source Software},
    author = {Kenneth Benoit and Kohei Watanabe and Haiyan Wang and Paul Nulty and Adam Obeng and Stefan Müller and Akitaka Matsuo},
    doi = {10.21105/joss.00774},
    url = {https://quanteda.io},
    volume = {3},
    number = {30},
    pages = {774},
    year = {2018},
  }

@Article{eder2016swra,
  title = {{Stylometry with R: a package for computational text analysis}},
  author = {Maciej Eder and Jan Rybicki and Mike Kestemont},
  journal = {R Journal},
  year = {2016},
  volume = {8},
  number = {1},
  pages = {107--121},
  url = {https://journal.r-project.org/archive/2016/RJ-2016-007/index.html},
}

@Article{feinerer2008tmii,
  title = {{Text mining infrastructure in R}},
  author = {Ingo Feinerer and Kurt Hornik and David Meyer},
  year = {2008},
  journal = {Journal of Statistical Software},
  volume = {25},
  number = {5},
  pages = {1--54},
  url = {https://www.jstatsoft.org/v25/i05/},
  month = {March},
}

@Article{grun2011taro,
  title = {{topicmodels: an R Package for fitting topic models}},
  author = {Bettina Gr\"un and Kurt Hornik},
  journal = {Journal of Statistical Software},
  year = {2011},
  volume = {40},
  number = {13},
  pages = {1--30},
  doi = {10.18637/jss.v040.i13},
}

@Article{seewave2008,
  title = {{seewave: a free modular tool for sound analysis and synthesis}},
  author = {J. Sueur and T. Aubin and C. Simonis},
  year = {2008},
  journal = {Bioacoustics},
  volume = {18},
  pages = {213-226},
  url = {https://www.tandfonline.com/doi/abs/10.1080/09524622.2008.9753600},
}

@Article{slige2016ttma,
  title = {{tidytext: text mining and analysis using tidy data principles in R}},
  author = {Julia Silge and David Robinson},
  doi = {10.21105/joss.00037},
  url = {http://dx.doi.org/10.21105/joss.00037},
  year = {2016},
  publisher = {The Open Journal},
  volume = {1},
  number = {3},
  journal = {Journal of Open Source Software},
}

@Article{spedicato2017dtmc,
    title = {{Discrete time Markov chains with R}},
    author = {Giorgio Alfredo Spedicato},
    month = {07},
    year = {2017},
    journal = {The R Journal},
    url = {https://journal.r-project.org/archive/2017/RJ-2017-036/index.html},
    note = {R package version 0.6.9.7},
  }

@Article{wickham2019wttt,
  title = {{Welcome to the tidyverse}},
  author = {Hadley Wickham and Mara Averick and Jennifer Bryan and Winston Chang and Lucy D'Agostino McGowan and Romain François and Garrett Grolemund and Alex Hayes and Lionel Henry and Jim Hester and Max Kuhn and Thomas Lin Pedersen and Evan Miller and Stephan Milton Bache and Kirill Müller and Jeroen Ooms and David Robinson and Dana Paige Seidel and Vitalie Spinu and Kohske Takahashi and Davis Vaughan and Claus Wilke and Kara Woo and Hiroaki Yutani},
  year = {2019},
  journal = {Journal of Open Source Software},
  volume = {4},
  number = {43},
  pages = {1686},
  doi = {10.21105/joss.01686},
}