MANIFEST.in

# Include important documentation files
include README.md
include LICENSE
include requirements.txt
include *.md
include *.sh
include *.yaml

# Include all config files
recursive-include config *.yaml
recursive-include configs *.yaml

# Include data files (but exclude large datasets)
recursive-include sprint/data *.json *.yaml *.txt *.csv
recursive-exclude sprint/data *.pth *.pt *.ckpt *.h5 *.pkl

# Include model architecture files and vocab files
recursive-include sprint/methods *_vocab.txt
recursive-include sprint/methods *.json
recursive-include sprint/methods/ergo2/TCR_Autoencoder *.pt

# Include test files
recursive-include tests *.py

# Exclude compiled Python files
global-exclude __pycache__
global-exclude *.py[co]
global-exclude .DS_Store
global-exclude *.so
global-exclude .git*

# Exclude output directories
prune outputs
prune logs
prune ergo2_logs
prune tmp_experiment_configs
prune examples/temp_cache