expipe-plugin-cinpla/pyproject.toml at main · CINPLA/expipe-plugin-cinpla · GitHub

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[project]
name = "expipe_plugin_cinpla"
version = "0.1.5"
authors = [
    { name = "Mikkel Lepperod", email = "mikkel@simula.no" },
    { name = "Alessio Buccino", email = "alessiop.buccino@gmail.com" },
]

description = "Expipe plugins for the CINPLA lab."
readme = "README.md"
requires-python = ">=3.10"
classifiers = [
    "Programming Language :: Python :: 3",
    "License :: OSI Approved :: MIT License",
    "Operating System :: OS Independent",
]

dependencies = [
    "expipe>=0.6.0",
    "neuroconv>=0.5.0",
    "pyopenephys>=1.2.0",
    "spikeinterface[full,widgets]>=0.101.2",
    "scikit-learn>=1.5.0",
    "pynwb>=2.8.0",
    "ipywidgets>=8.1.1",
    "nwbwidgets>=0.11.3",
    "tbb>=2021.11.0; platform_system != 'Darwin'",
    "pynapple>=0.5.1",
    "lxml",
    "spatial-maps",
    "head-direction",
    "pytz",
]

[project.urls]
homepage = "https://github.com/CINPLA/expipe-plugin-cinpla"
repository = "https://github.com/CINPLA/expipe-plugin-cinpla"

[build-system]
requires = ["setuptools>=62.0"]
build-backend = "setuptools.build_meta"

[tool.setuptools]
include-package-data = true

[tool.setuptools.packages.find]
where = ["src"]
include = ["expipe_plugin_cinpla*"]
namespaces = false

[project.optional-dependencies]
dev = ["pre-commit", "black[jupyter]", "isort", "ruff"]
test = ["pytest", "pytest-cov", "pytest-dependency", "mountainsort5"]
docs = ["sphinx-gallery", "sphinx_rtd_theme"]
full = [
    "expipe_plugin_cinpla[dev]",
    "expipe_plugin_cinpla[test]",
    "expipe_plugin_cinpla[docs]",
]

[tool.coverage.run]
omit = ["tests/*"]

[tool.black]
line-length = 120

[tool.ruff]
# Exclude a variety of commonly ignored directories.
exclude = [
    ".bzr",
    ".direnv",
    ".eggs",
    ".git",
    ".hg",
    ".mypy_cache",
    ".nox",
    ".pants.d",
    ".pytype",
    ".ruff_cache",
    ".svn",
    ".tox",
    ".venv",
    "__pypackages__",
    "_build",
    "buck-out",
    "build",
    "dist",
    "node_modules",
    "venv",
]

# In addition to the standard set of exclusions, omit:
extend-exclude = ["tests/test_data"]

# Same as Black.
line-length = 120
indent-width = 4

# Assume Python 3.11.
target-version = "py311"

[tool.ruff.lint]
# Enable Pyflakes (`F`) and a subset of the pycodestyle (`E`)  codes by default.
# Unlike Flake8, Ruff doesn't enable pycodestyle warnings (`W`) or
# McCabe complexity (`C901`) by default.
select = ["E4", "E7", "E9", "F"]
ignore = []

# Allow fix for all enabled rules (when `--fix`) is provided.
fixable = ["ALL"]
unfixable = []

# Allow unused variables when underscore-prefixed.
dummy-variable-rgx = "^(_+|(_+[a-zA-Z0-9_]*[a-zA-Z0-9]+?))$"

[tool.ruff.lint.per-file-ignores]
"src/expipe_plugin_cinpla/cli/utils.py" = ["F403"]
"src/expipe_plugin_cinpla/nwbutils/nwbwidgetsunitviewer.py" = ["F821"]
"src/expipe_plugin_cinpla/widgets/utils.py" = ["F841"]                 # TODO: fix warning
"tests/test_cli.py" = ["F841"]                                         # TODO: fix warning
"tests/test_script.py" = ["F841"]                                      # TODO: fix warning