RDF errors show in `mapmaker` when using `mapknowledge` with latest SCKAN

[dbrnz]

This is from running mapmaker. Similar warnings are generated from map-server. Are they because something's not quite right with the latest SCKAN release??

2026-03-12 11:29:07 [warning  ] [rdflib.term.URIRef('http://uri.interlex.org/composer/uris/set/portal/5'), [['ilxtr:hasProjectionLaterality', 'PATO:0000618'], ['ilxtr:hasSomaPhenotype', 'PATO:0000366']]] type=knowledge
2026-03-12 11:29:07 [warning  ] [rdflib.term.URIRef('http://uri.interlex.org/tgbugs/uris/readable/sparc-nlp/kidney/153'), [['ilxtr:hasSomaPhenotype', 'PATO:0000366']]] type=knowledge
2026-03-12 11:29:07 [warning  ] [rdflib.term.URIRef('http://uri.interlex.org/tgbugs/uris/readable/sparc-nlp/kidney/154'), [['ilxtr:hasSomaPhenotype', 'PATO:0000367']]] type=knowledge
2026-03-12 11:29:07 [warning  ] [rdflib.term.URIRef('http://uri.interlex.org/composer/uris/set/portal/2'), [['ilxtr:hasSomaPhenotype', 'PATO:0000366']]] type=knowledge
2026-03-12 11:29:07 [warning  ] [rdflib.term.URIRef('http://uri.interlex.org/tgbugs/uris/readable/sparc-nlp/liver/115'), [['ilxtr:hasSomaPhenotype', 'PATO:0000367']]] type=knowledge
2026-03-12 11:29:07 [warning  ] [rdflib.term.URIRef('http://uri.interlex.org/tgbugs/uris/readable/sparc-nlp/liver/118'), [['ilxtr:hasSomaPhenotype', 'PATO:0000367']]] type=knowledge
2026-03-12 11:29:07 [warning  ] [rdflib.term.URIRef('http://uri.interlex.org/tgbugs/uris/readable/sparc-nlp/liver/117'), [['ilxtr:hasSomaPhenotype', 'PATO:0000366']]] type=knowledge
2026-03-12 11:29:07 [warning  ] [rdflib.term.URIRef('http://uri.interlex.org/tgbugs/uris/readable/sparc-nlp/liver/122'), [['ilxtr:hasSomaPhenotype', 'PATO:0000366']]] type=knowledge
2026-03-12 11:29:08 [warning  ] [rdflib.term.URIRef('http://uri.interlex.org/composer/uris/set/pain1/3'), [['ilxtr:hasAxonPhenotype', 'ILX:0796514']]] type=knowledge
2026-03-12 11:29:08 [warning  ] [rdflib.term.URIRef('http://uri.interlex.org/composer/uris/set/pain1/1'), [['ilxtr:hasAxonPhenotype', 'ILX:0796514']]] type=knowledge
2026-03-12 11:29:08 [warning  ] [rdflib.term.URIRef('http://uri.interlex.org/composer/uris/set/pain1/4'), [['ilxtr:hasAxonPhenotype', 'ILX:0796516']]] type=knowledge
2026-03-12 11:29:08 [warning  ] [rdflib.term.URIRef('http://uri.interlex.org/composer/uris/set/pain1/2'), [['ilxtr:hasAxonPhenotype', 'ILX:0796516']]] type=knowledge
2026-03-12 11:29:08 [warning  ] [rdflib.term.URIRef('http://uri.interlex.org/composer/uris/set/pain1/12'), [['ilxtr:hasAxonPhenotype', 'ILX:0796514']]] type=knowledge
2026-03-12 11:29:08 [warning  ] [rdflib.term.URIRef('http://uri.interlex.org/composer/uris/set/pain1/7'), [['ilxtr:hasAxonPhenotype', 'ILX:0796514']]] type=knowledge
2026-03-12 11:29:08 [warning  ] [rdflib.term.URIRef('http://uri.interlex.org/composer/uris/set/pain1/5'), [['ilxtr:hasAxonPhenotype', 'ILX:0796516']]] type=knowledge
2026-03-12 11:29:08 [warning  ] [rdflib.term.URIRef('http://uri.interlex.org/composer/uris/set/pain1/6'), [['ilxtr:hasAxonPhenotype', 'ILX:0796516']]] type=knowledge
2026-03-12 11:29:08 [warning  ] [rdflib.term.URIRef('http://uri.interlex.org/composer/uris/set/pain1/8'), [['ilxtr:hasAxonPhenotype', 'ILX:0796514']]] type=knowledge
2026-03-12 11:29:08 [warning  ] [rdflib.term.URIRef('http://uri.interlex.org/composer/uris/set/pain1/9'), [['ilxtr:hasAxonPhenotype', 'ILX:0796516']]] type=knowledge

[napakalas]

Confirmed: those warnings are expected and indicate new predicates currently not mapped in map-knowledge

New unmapped predicates:

• ilxtr:hasProjectionLaterality -> PATO:0000618 (bilateral)
• ilxtr:hasSomaPhenotype -> PATO:0000366 (left), PATO:0000367 (right)
• ilxtr:hasAxonPhenotype -> ILX:0796514 (Aδ nerve fiber), ILX:0796514 (type Aδ (delta) nerve fiber)

To do:

• Add extraction in and expose as structured fields (e.g. laterality, soma_phenotype, axon_phenotype_type).
• Handle display/usage in mapmaker as new attributes.