Number of threads: 4
Complex data interpolation
Initializing Sinc interpolator
Azimuth Carrier Poly
Polynomial Order: 5 - by - 3
11967.9 -575.794 31.7785 0.954085
-47241.6 2301.56 -111.96 -3.57909
46620 -2299.58 97.1936 3.37479
-9.04525e-09 1.14979e-08 -4.21725e-09 0
6.02973e-09 -3.23611e-09 0 0
-1.51145e-09 0 0 0
Range Carrier Poly
Polynomial Order: 0 - by - 0
0
Range offsets poly
Polynomial Order: 0 - by - 0
0
Azimuth offsets poly
Polynomial Order: 0 - by - 0
0
Doppler poly
Polynomial Order: 0 - by - 2
0.0333558 -50.0337 82464.7
Reading in the image
At line 1000
Interpolating image
At line 1000
Elapsed time: 15.9726562
GDAL close: fine_offsets/IW3/range_09.off.vrt
GDAL close: fine_offsets/IW3/azimuth_09.off.vrt
GDAL close: ion/upper/fine_interferogram/IW3/secondary_burst_09.slc.vrt
API close: ion/upper/fine_interferogram/IW3/secondary_resamp_burst_09.slc
API open (R): ion/upper/fine_interferogram/IW3/secondary_resamp_burst_09.slc
API close: ion/upper/fine_interferogram/IW3/secondary_resamp_burst_09.slc
Adjust valid samples
Before: 274 23521
Offsets : 11.545783996582031 12.257086753845215
Adjust valid lines
Before: 27 1468
Offsets : -1.5180559158325195 -1.4518603086471558
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after adjustment (index in merged image, index starts from 1):
burst fl ll fc lc fl ll fc lc fl ll fc lc
+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
1 51 1450 601 20600 501 1900 20601 44400 2301 3750 44401 67200
2 1451 2800 601 20600 1901 3250 20601 44400 3751 5100 44401 67200
3 2801 4150 601 20600 3251 4600 20601 44400 5101 6400 44401 67200
4 4151 5500 601 20600 4601 5950 20601 44400 6401 7750 44401 67200
5 5501 6850 601 20600 5951 7300 20601 44400 7751 9100 44401 67200
6 6851 8150 601 20600 7301 8650 20601 44400 9101 10450 44401 67200
7 8151 9500 401 20600 8651 10000 20601 44400 10451 11800 44401 67200
8 9501 10850 401 20600 10001 11300 20601 44400 11801 13150 44401 67200
9 10851 12200 401 20600 11301 12650 20601 44400 13151 14450 44401 67200
10 12651 14000 20201 44400
Multilooking ion/lower/merged/topophase.flat.full ...
GDAL open (R): ion/lower/merged/topophase.flat.full.vrt
API open (WR): ion/lower/merged/topophase.flat
GDAL close: ion/lower/merged/topophase.flat.full.vrt
API close: ion/lower/merged/topophase.flat
API open (R): ion/lower/merged/topophase.flat
API close: ion/lower/merged/topophase.flat
Writing geotrans to VRT for ion/lower/merged/topophase.flat
after adjustment (index in merged image, index starts from 1):
burst fl ll fc lc fl ll fc lc fl ll fc lc
+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
1 51 1450 601 20600 501 1900 20601 44400 2301 3750 44401 67200
2 1451 2800 601 20600 1901 3250 20601 44400 3751 5100 44401 67200
3 2801 4150 601 20600 3251 4600 20601 44400 5101 6400 44401 67200
4 4151 5500 601 20600 4601 5950 20601 44400 6401 7750 44401 67200
5 5501 6850 601 20600 5951 7300 20601 44400 7751 9100 44401 67200
6 6851 8150 601 20600 7301 8650 20601 44400 9101 10450 44401 67200
7 8151 9500 401 20600 8651 10000 20601 44400 10451 11800 44401 67200
8 9501 10850 401 20600 10001 11300 20601 44400 11801 13150 44401 67200
9 10851 12200 401 20600 11301 12650 20601 44400 13151 14450 44401 67200
10 12651 14000 20201 44400
Multilooking ion/upper/merged/topophase.flat.full ...
GDAL open (R): ion/upper/merged/topophase.flat.full.vrt
API open (WR): ion/upper/merged/topophase.flat
GDAL close: ion/upper/merged/topophase.flat.full.vrt
API close: ion/upper/merged/topophase.flat
API open (R): ion/upper/merged/topophase.flat
API close: ion/upper/merged/topophase.flat
Writing geotrans to VRT for ion/upper/merged/topophase.flat
unwrapping lower and upper band interferograms
snaphu v1.4.2
Reading wrapped phase from file ion/lower/merged/topophase.flat
No weight file specified. Assuming uniform weights
Reading correlation data from file ion/lower/merged/topophase.cor
Calculating smooth-solution cost parameters
Initializing flows with MCF algorithm
Integrating phase
Writing output to file ion/lower/merged/filt_topophase.unw
Growing connected components on second pass
snaphu v1.4.2
Reading unwrapped phase from file ion/lower/merged/filt_topophase.unw
No weight file specified. Assuming uniform weights
Reading correlation data from file ion/lower/merged/topophase.cor
Calculating smooth-solution cost parameters
Growing connected component mask
Writing connected components to file ion/lower/merged/filt_topophase.unw.conncomp
API open (R): ion/lower/merged/filt_topophase.unw
API close: ion/lower/merged/filt_topophase.unw
GDAL open (R): ion/lower/merged/filt_topophase.unw.vrt
GDAL close: ion/lower/merged/filt_topophase.unw.vrt
API open (R): ion/lower/merged/filt_topophase.unw.conncomp
API close: ion/lower/merged/filt_topophase.unw.conncomp
GDAL open (R): ion/lower/merged/filt_topophase.unw.conncomp.vrt
GDAL close: ion/lower/merged/filt_topophase.unw.conncomp.vrt
imageMath.py -e='a_0*(abs(b)!=0);a_1*(abs(b)!=0)' --a=tmp.unw --b=ion/lower/merged/topophase.flat -s BIL -o=ion/lower/merged/filt_topophase.unw
GDAL open (R): ion/lower/merged/filt_topophase.unw.vrt
GDAL close: ion/lower/merged/filt_topophase.unw.vrt
This is the Open Source version of ISCE.
Some of the workflows depend on a separate licensed package.
To obtain the licensed package, please make a request for ISCE
through the website: https://download.jpl.nasa.gov/ops/request/index.cfm.
Alternatively, if you are a member, or can become a member of WinSAR
you may be able to obtain access to a version of the licensed sofware at
https://winsar.unavco.org/software/isce
args: Namespace(hh=None, equation='a_0*(abs(b)!=0);a_1*(abs(b)!=0)', out='ion/lower/merged/filt_topophase.unw', scheme='BIL', dtype='float', debug=False, noxml=False)
files: ['--a=tmp.unw', '--b=ion/lower/merged/topophase.flat']
Bounding boxes dont match. Not adding bbox info.
snaphu v1.4.2
Reading wrapped phase from file ion/upper/merged/topophase.flat
No weight file specified. Assuming uniform weights
Reading correlation data from file ion/lower/merged/topophase.cor
Calculating smooth-solution cost parameters
Initializing flows with MCF algorithm
Integrating phase
Writing output to file ion/upper/merged/filt_topophase.unw
Growing connected components on second pass
snaphu v1.4.2
Reading unwrapped phase from file ion/upper/merged/filt_topophase.unw
No weight file specified. Assuming uniform weights
Reading correlation data from file ion/lower/merged/topophase.cor
Calculating smooth-solution cost parameters
Growing connected component mask
Writing connected components to file ion/upper/merged/filt_topophase.unw.conncomp
API open (R): ion/upper/merged/filt_topophase.unw
API close: ion/upper/merged/filt_topophase.unw
GDAL open (R): ion/upper/merged/filt_topophase.unw.vrt
GDAL close: ion/upper/merged/filt_topophase.unw.vrt
API open (R): ion/upper/merged/filt_topophase.unw.conncomp
API close: ion/upper/merged/filt_topophase.unw.conncomp
GDAL open (R): ion/upper/merged/filt_topophase.unw.conncomp.vrt
GDAL close: ion/upper/merged/filt_topophase.unw.conncomp.vrt
imageMath.py -e='a_0*(abs(b)!=0);a_1*(abs(b)!=0)' --a=tmp.unw --b=ion/upper/merged/topophase.flat -s BIL -o=ion/upper/merged/filt_topophase.unw
GDAL open (R): ion/upper/merged/filt_topophase.unw.vrt
GDAL close: ion/upper/merged/filt_topophase.unw.vrt
This is the Open Source version of ISCE.
Some of the workflows depend on a separate licensed package.
To obtain the licensed package, please make a request for ISCE
through the website: https://download.jpl.nasa.gov/ops/request/index.cfm.
Alternatively, if you are a member, or can become a member of WinSAR
you may be able to obtain access to a version of the licensed sofware at
https://winsar.unavco.org/software/isce
args: Namespace(hh=None, equation='a_0*(abs(b)!=0);a_1*(abs(b)!=0)', out='ion/upper/merged/filt_topophase.unw', scheme='BIL', dtype='float', debug=False, noxml=False)
files: ['--a=tmp.unw', '--b=ion/upper/merged/topophase.flat']
Bounding boxes dont match. Not adding bbox info.
Do bridging ion/lower/merged/filt_topophase.unw
Deramp
Deramp
Deramp
Deramp
Deramp
Deramp
Deramp
Deramp
Deramp
Deramp
Deramp
Deramp
Deramp
Deramp
Deramp
Deramp
Deramp
Deramp
Deramp
Deramp
imageMath.py -e='a_0*(abs(b)!=0);a_1*(abs(b)!=0)' --a=tmp.unw --b=ion/lower/merged/filt_topophase.unw.conncomp -s BIL -o=ion/lower/merged/filt_topophase.unw
GDAL open (R): ion/lower/merged/filt_topophase.unw.vrt
GDAL close: ion/lower/merged/filt_topophase.unw.vrt
This is the Open Source version of ISCE.
Some of the workflows depend on a separate licensed package.
To obtain the licensed package, please make a request for ISCE
through the website: https://download.jpl.nasa.gov/ops/request/index.cfm.
Alternatively, if you are a member, or can become a member of WinSAR
you may be able to obtain access to a version of the licensed sofware at
https://winsar.unavco.org/software/isce
args: Namespace(hh=None, equation='a_0*(abs(b)!=0);a_1*(abs(b)!=0)', out='ion/lower/merged/filt_topophase.unw', scheme='BIL', dtype='float', debug=False, noxml=False)
files: ['--a=tmp.unw', '--b=ion/lower/merged/filt_topophase.unw.conncomp']
Do bridging ion/upper/merged/filt_topophase.unw
Deramp
Deramp
Deramp
Deramp
Deramp
Deramp
Deramp
Deramp
Deramp
Deramp
Deramp
Deramp
Deramp
Deramp
Deramp
Deramp
Deramp
Deramp
Deramp
Deramp
imageMath.py -e='a_0*(abs(b)!=0);a_1*(abs(b)!=0)' --a=tmp.unw --b=ion/upper/merged/filt_topophase.unw.conncomp -s BIL -o=ion/upper/merged/filt_topophase.unw
GDAL open (R): ion/upper/merged/filt_topophase.unw.vrt
GDAL close: ion/upper/merged/filt_topophase.unw.vrt
This is the Open Source version of ISCE.
Some of the workflows depend on a separate licensed package.
To obtain the licensed package, please make a request for ISCE
through the website: https://download.jpl.nasa.gov/ops/request/index.cfm.
Alternatively, if you are a member, or can become a member of WinSAR
you may be able to obtain access to a version of the licensed sofware at
https://winsar.unavco.org/software/isce
args: Namespace(hh=None, equation='a_0*(abs(b)!=0);a_1*(abs(b)!=0)', out='ion/upper/merged/filt_topophase.unw', scheme='BIL', dtype='float', debug=False, noxml=False)
files: ['--a=tmp.unw', '--b=ion/upper/merged/filt_topophase.unw.conncomp']
Writing geotrans to VRT for ion/lower/merged/40rlks_10alks/topophase.flat
Writing geotrans to VRT for ion/upper/merged/40rlks_10alks/topophase.flat
Multilooking ion/lower/merged/40rlks_10alks/topophase.flat ...
GDAL open (R): ion/lower/merged/40rlks_10alks/topophase.flat.vrt
API open (WR): ion/lower/merged/topophase.flat
GDAL close: ion/lower/merged/40rlks_10alks/topophase.flat.vrt
API close: ion/lower/merged/topophase.flat
API open (R): ion/lower/merged/topophase.flat
API close: ion/lower/merged/topophase.flat
Writing geotrans to VRT for ion/lower/merged/topophase.flat
Multilooking ion/upper/merged/40rlks_10alks/topophase.flat ...
GDAL open (R): ion/upper/merged/40rlks_10alks/topophase.flat.vrt
API open (WR): ion/upper/merged/topophase.flat
GDAL close: ion/upper/merged/40rlks_10alks/topophase.flat.vrt
API close: ion/upper/merged/topophase.flat
API open (R): ion/upper/merged/topophase.flat
API close: ion/upper/merged/topophase.flat
Writing geotrans to VRT for ion/upper/merged/topophase.flat
computing ionosphere
after adjustment:
Traceback (most recent call last):
File "/opt/conda/envs/topsapp_env/lib/python3.9/runpy.py", line 197, in _run_module_as_main
return _run_code(code, main_globals, None,
File "/opt/conda/envs/topsapp_env/lib/python3.9/runpy.py", line 87, in _run_code
exec(code, run_globals)
File "/opt/conda/envs/topsapp_env/lib/python3.9/site-packages/isce2_topsapp/__main__.py", line 352, in <module>
main()
File "/opt/conda/envs/topsapp_env/lib/python3.9/site-packages/isce2_topsapp/__main__.py", line 348, in main
sys.exit(process_entry_point.load()())
File "/opt/conda/envs/topsapp_env/lib/python3.9/site-packages/isce2_topsapp/__main__.py", line 207, in gunw_slc
iono_processing(
File "/opt/conda/envs/topsapp_env/lib/python3.9/site-packages/isce2_topsapp/iono_proc.py", line 118, in iono_processing
runIon.ionosphere(topsapp, ionParam)
File "/opt/conda/envs/topsapp_env/lib/python3.9/site-packages/isce/components/isceobj/TopsProc/runIon.py", line 1308, in ionosphere
ionos = computeIonosphere(lowerUnw, upperUnw, cor, fl, fu, adjFlag, corThresholdAdj, 0)
File "/opt/conda/envs/topsapp_env/lib/python3.9/site-packages/isce/components/isceobj/TopsProc/runIon.py", line 1250, in computeIonosphere
print('max phase difference: {}'.format(np.amax(unw_diff)))
File "<__array_function__ internals>", line 180, in amax
File "/opt/conda/envs/topsapp_env/lib/python3.9/site-packages/numpy/core/fromnumeric.py", line 2793, in amax
return _wrapreduction(a, np.maximum, 'max', axis, None, out,
File "/opt/conda/envs/topsapp_env/lib/python3.9/site-packages/numpy/core/fromnumeric.py", line 86, in _wrapreduction
return ufunc.reduce(obj, axis, dtype, out, **passkwargs)
ValueError: zero-size array to reduction operation maximum which has no identity
{'expiration_time': '2023-11-22T00:00:00+00:00',
'job_id': 'b9a37165-8c1c-4104-a52a-99e6bcd28a2a',
'job_parameters': {'compute_solid_earth_tide': True,
'estimate_ionosphere_delay': True,
'frame_id': 20342,
'granules': ['S1A_IW_SLC__1SDV_20220210T162911_20220210T162938_041853_04FB8A_974D',
'S1A_IW_SLC__1SDV_20220210T162936_20220210T163004_041853_04FB8A_4E1F'],
'secondary_granules': ['S1A_IW_SLC__1SDV_20220117T162912_20220117T162939_041503_04EF80_77A2',
'S1A_IW_SLC__1SDV_20220117T162937_20220117T163004_041503_04EF80_0BFA'],
'weather_model': 'HRRR'},
'job_type': 'INSAR_ISCE_TEST',
'logs': ['https://hyp3-a19-jpl-contentbucket-1wfnatpznlg8b.s3.us-west-2.amazonaws.com/b9a37165-8c1c-4104-a52a-99e6bcd28a2a/b9a37165-8c1c-4104-a52a-99e6bcd28a2a.log'],
'name': 'Anchorage_131_HRRR_0524',
'processing_times': [9269.375],
'request_time': '2023-05-24T23:49:30+00:00',
'status_code': 'FAILED',
'user_id': 'cmarshak'}
{'expiration_time': '2023-11-22T00:00:00+00:00',
'job_id': 'de0e0133-39b4-4bc1-9c44-352bbdb400a8',
'job_parameters': {'compute_solid_earth_tide': True,
'estimate_ionosphere_delay': True,
'frame_id': 20342,
'granules': ['S1A_IW_SLC__1SDV_20220129T162911_20220129T162938_041678_04F56E_51C5',
'S1A_IW_SLC__1SDV_20220129T162936_20220129T163004_041678_04F56E_60B3'],
'secondary_granules': ['S1A_IW_SLC__1SDV_20220117T162912_20220117T162939_041503_04EF80_77A2',
'S1A_IW_SLC__1SDV_20220117T162937_20220117T163004_041503_04EF80_0BFA'],
'weather_model': 'HRRR'},
'job_type': 'INSAR_ISCE_TEST',
'logs': ['https://hyp3-a19-jpl-contentbucket-1wfnatpznlg8b.s3.us-west-2.amazonaws.com/de0e0133-39b4-4bc1-9c44-352bbdb400a8/de0e0133-39b4-4bc1-9c44-352bbdb400a8.log'],
'name': 'Anchorage_131_HRRR_0524',
'processing_times': [9132.298],
'request_time': '2023-05-24T23:49:30+00:00',
'status_code': 'FAILED',
'user_id': 'cmarshak'}
{'expiration_time': '2023-11-22T00:00:00+00:00',
'job_id': '212c21e5-61df-4f58-aabc-84f437e3ab76',
'job_parameters': {'compute_solid_earth_tide': True,
'estimate_ionosphere_delay': True,
'frame_id': 20342,
'granules': ['S1A_IW_SLC__1SDV_20220210T162911_20220210T162938_041853_04FB8A_974D',
'S1A_IW_SLC__1SDV_20220210T162936_20220210T163004_041853_04FB8A_4E1F'],
'secondary_granules': ['S1A_IW_SLC__1SDV_20220129T162911_20220129T162938_041678_04F56E_51C5',
'S1A_IW_SLC__1SDV_20220129T162936_20220129T163004_041678_04F56E_60B3'],
'weather_model': 'HRRR'},
'job_type': 'INSAR_ISCE_TEST',
'logs': ['https://hyp3-a19-jpl-contentbucket-1wfnatpznlg8b.s3.us-west-2.amazonaws.com/212c21e5-61df-4f58-aabc-84f437e3ab76/212c21e5-61df-4f58-aabc-84f437e3ab76.log'],
'name': 'Anchorage_131_HRRR_0524',
'processing_times': [9044.308],
'request_time': '2023-05-24T23:49:30+00:00',
'status_code': 'FAILED',
'user_id': 'cmarshak'}
{'expiration_time': '2023-11-22T00:00:00+00:00',
'job_id': '781c2c86-a6df-4617-bcb1-73bfa73a49c8',
'job_parameters': {'compute_solid_earth_tide': True,
'estimate_ionosphere_delay': True,
'frame_id': 20342,
'granules': ['S1A_IW_SLC__1SDV_20220222T162911_20220222T162938_042028_0501A2_0E39',
'S1A_IW_SLC__1SDV_20220222T162936_20220222T163004_042028_0501A2_8FED'],
'secondary_granules': ['S1A_IW_SLC__1SDV_20220129T162911_20220129T162938_041678_04F56E_51C5',
'S1A_IW_SLC__1SDV_20220129T162936_20220129T163004_041678_04F56E_60B3'],
'weather_model': 'HRRR'},
'job_type': 'INSAR_ISCE_TEST',
'logs': ['https://hyp3-a19-jpl-contentbucket-1wfnatpznlg8b.s3.us-west-2.amazonaws.com/781c2c86-a6df-4617-bcb1-73bfa73a49c8/781c2c86-a6df-4617-bcb1-73bfa73a49c8.log'],
'name': 'Anchorage_131_HRRR_0524',
'processing_times': [9114.568],
'request_time': '2023-05-24T23:49:30+00:00',
'status_code': 'FAILED',
'user_id': 'cmarshak'}
{'expiration_time': '2023-11-22T00:00:00+00:00',
'job_id': 'b81616b8-26b0-4b7a-9cd0-ee4484371768',
'job_parameters': {'compute_solid_earth_tide': True,
'estimate_ionosphere_delay': True,
'frame_id': 20342,
'granules': ['S1A_IW_SLC__1SDV_20220222T162911_20220222T162938_042028_0501A2_0E39',
'S1A_IW_SLC__1SDV_20220222T162936_20220222T163004_042028_0501A2_8FED'],
'secondary_granules': ['S1A_IW_SLC__1SDV_20220210T162911_20220210T162938_041853_04FB8A_974D',
'S1A_IW_SLC__1SDV_20220210T162936_20220210T163004_041853_04FB8A_4E1F'],
'weather_model': 'HRRR'},
'job_type': 'INSAR_ISCE_TEST',
'logs': ['https://hyp3-a19-jpl-contentbucket-1wfnatpznlg8b.s3.us-west-2.amazonaws.com/b81616b8-26b0-4b7a-9cd0-ee4484371768/b81616b8-26b0-4b7a-9cd0-ee4484371768.log'],
'name': 'Anchorage_131_HRRR_0524',
'processing_times': [9218.873],
'request_time': '2023-05-24T23:49:30+00:00',
'status_code': 'FAILED',
'user_id': 'cmarshak'}
Describe the bug
I submitted 15 frames over Anchorage AK. 5/15 failed during the iono step. Here is a sample log:
All the failed jobs are here: